Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24315
Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,065,954 | + | BWI76_RS24310 | 0.60 | +0.4 | |
5,066,077 | + | BWI76_RS24310 | 0.65 | -0.7 | |
5,066,173 | - | BWI76_RS24310 | 0.70 | -0.4 | |
5,066,400 | - | BWI76_RS24310 | 0.80 | +0.1 | |
5,066,405 | - | BWI76_RS24310 | 0.80 | -0.8 | |
5,066,479 | - | BWI76_RS24310 | 0.84 | -0.9 | |
5,066,546 | + | BWI76_RS24310 | 0.87 | +1.2 | |
5,066,561 | - | BWI76_RS24310 | 0.88 | -0.5 | |
5,066,924 | + | -0.0 | |||
5,066,939 | + | -0.8 | |||
5,066,939 | + | -0.2 | |||
5,066,985 | - | -2.4 | |||
5,067,060 | - | -2.2 | |||
5,067,255 | + | BWI76_RS24315 | 0.22 | -3.3 | |
5,067,263 | - | +1.5 | |||
5,067,554 | - | BWI76_RS24315 | 0.43 | -0.5 | |
5,067,656 | - | BWI76_RS24315 | 0.50 | -0.8 | |
5,067,767 | + | BWI76_RS24315 | 0.58 | -1.2 | |
5,067,775 | - | BWI76_RS24315 | 0.58 | -1.9 | |
5,067,893 | - | BWI76_RS24315 | 0.67 | -2.2 | |
5,068,058 | - | BWI76_RS24315 | 0.78 | -1.9 | |
5,068,135 | + | BWI76_RS24315 | 0.84 | -0.3 | |
5,068,279 | - | -1.7 | |||
5,068,326 | - | -1.5 | |||
5,069,213 | + | +0.8 | |||
5,069,221 | - | +1.3 | |||
5,069,227 | + | -1.3 |
Or see this region's nucleotide sequence