Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23725

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23720 and BWI76_RS23725 are separated by 109 nucleotidesBWI76_RS23725 and BWI76_RS23730 are separated by 13 nucleotides BWI76_RS23720: BWI76_RS23720 - calcium-binding protein, at 4,951,725 to 4,952,603 _RS23720 BWI76_RS23725: BWI76_RS23725 - 2-deoxy-D-ribonate transporter 2 (from data), at 4,952,713 to 4,954,050 _RS23725 BWI76_RS23730: BWI76_RS23730 - glycerate kinase, at 4,954,064 to 4,955,239 _RS23730 Position (kb) 4952 4953 4954 4955Strain fitness (log2 ratio) -1 0 1 2at 4951.937 kb on + strand, within BWI76_RS23720at 4951.963 kb on - strand, within BWI76_RS23720at 4951.991 kb on - strand, within BWI76_RS23720at 4952.238 kb on + strand, within BWI76_RS23720at 4952.333 kb on - strand, within BWI76_RS23720at 4952.368 kb on - strand, within BWI76_RS23720at 4952.488 kb on - strand, within BWI76_RS23720at 4952.711 kb on - strandat 4952.864 kb on + strand, within BWI76_RS23725at 4952.872 kb on - strand, within BWI76_RS23725at 4952.893 kb on - strand, within BWI76_RS23725at 4952.901 kb on - strand, within BWI76_RS23725at 4952.924 kb on - strand, within BWI76_RS23725at 4953.018 kb on + strand, within BWI76_RS23725at 4953.021 kb on - strand, within BWI76_RS23725at 4953.026 kb on - strand, within BWI76_RS23725at 4953.148 kb on + strand, within BWI76_RS23725at 4953.377 kb on + strand, within BWI76_RS23725at 4953.536 kb on - strand, within BWI76_RS23725at 4953.615 kb on + strand, within BWI76_RS23725at 4953.625 kb on - strand, within BWI76_RS23725at 4953.625 kb on - strand, within BWI76_RS23725at 4953.694 kb on + strand, within BWI76_RS23725at 4953.715 kb on + strand, within BWI76_RS23725at 4953.718 kb on - strand, within BWI76_RS23725at 4953.796 kb on + strand, within BWI76_RS23725at 4953.914 kb on + strand, within BWI76_RS23725at 4953.922 kb on - strandat 4954.401 kb on + strand, within BWI76_RS23730at 4954.409 kb on - strand, within BWI76_RS23730at 4954.420 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.568 kb on + strand, within BWI76_RS23730at 4954.669 kb on + strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.677 kb on - strand, within BWI76_RS23730at 4954.839 kb on - strand, within BWI76_RS23730at 4954.900 kb on + strand, within BWI76_RS23730

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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4,951,937 + BWI76_RS23720 0.24 -0.1
4,951,963 - BWI76_RS23720 0.27 -0.6
4,951,991 - BWI76_RS23720 0.30 -0.1
4,952,238 + BWI76_RS23720 0.58 -0.8
4,952,333 - BWI76_RS23720 0.69 -0.5
4,952,368 - BWI76_RS23720 0.73 -0.1
4,952,488 - BWI76_RS23720 0.87 -0.9
4,952,711 - +0.9
4,952,864 + BWI76_RS23725 0.11 +1.8
4,952,872 - BWI76_RS23725 0.12 -0.1
4,952,893 - BWI76_RS23725 0.13 -0.5
4,952,901 - BWI76_RS23725 0.14 -0.1
4,952,924 - BWI76_RS23725 0.16 -0.7
4,953,018 + BWI76_RS23725 0.23 +0.9
4,953,021 - BWI76_RS23725 0.23 +0.1
4,953,026 - BWI76_RS23725 0.23 +0.9
4,953,148 + BWI76_RS23725 0.33 +0.2
4,953,377 + BWI76_RS23725 0.50 +0.3
4,953,536 - BWI76_RS23725 0.62 +1.2
4,953,615 + BWI76_RS23725 0.67 -1.3
4,953,625 - BWI76_RS23725 0.68 +0.2
4,953,625 - BWI76_RS23725 0.68 +0.4
4,953,694 + BWI76_RS23725 0.73 +0.1
4,953,715 + BWI76_RS23725 0.75 +0.8
4,953,718 - BWI76_RS23725 0.75 +0.6
4,953,796 + BWI76_RS23725 0.81 +0.7
4,953,914 + BWI76_RS23725 0.90 -0.1
4,953,922 - +0.1
4,954,401 + BWI76_RS23730 0.29 +1.1
4,954,409 - BWI76_RS23730 0.29 -0.7
4,954,420 + BWI76_RS23730 0.30 +0.4
4,954,568 + BWI76_RS23730 0.43 +1.0
4,954,568 + BWI76_RS23730 0.43 +0.4
4,954,669 + BWI76_RS23730 0.51 +0.8
4,954,677 - BWI76_RS23730 0.52 -0.1
4,954,677 - BWI76_RS23730 0.52 +0.1
4,954,839 - BWI76_RS23730 0.66 +0.7
4,954,900 + BWI76_RS23730 0.71 +0.3

Or see this region's nucleotide sequence