Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21025

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21020 and BWI76_RS21025 are separated by 155 nucleotidesBWI76_RS21025 and BWI76_RS21030 are separated by 68 nucleotides BWI76_RS21020: BWI76_RS21020 - MFS transporter, at 4,397,680 to 4,398,876 _RS21020 BWI76_RS21025: BWI76_RS21025 - GMP synthase (glutamine-hydrolyzing), at 4,399,032 to 4,400,609 _RS21025 BWI76_RS21030: BWI76_RS21030 - IMP dehydrogenase, at 4,400,678 to 4,402,144 _RS21030 Position (kb) 4399 4400 4401Strain fitness (log2 ratio) -1 0 1 2at 4398.114 kb on + strand, within BWI76_RS21020at 4398.155 kb on - strand, within BWI76_RS21020at 4398.169 kb on + strand, within BWI76_RS21020at 4398.197 kb on + strand, within BWI76_RS21020at 4398.205 kb on - strand, within BWI76_RS21020at 4398.216 kb on + strand, within BWI76_RS21020at 4398.224 kb on - strand, within BWI76_RS21020at 4398.224 kb on - strand, within BWI76_RS21020at 4398.490 kb on - strandat 4398.505 kb on - strand, within BWI76_RS21020at 4398.562 kb on - strand, within BWI76_RS21020at 4398.562 kb on - strand, within BWI76_RS21020at 4398.632 kb on - strand, within BWI76_RS21020at 4401.241 kb on - strand, within BWI76_RS21030

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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4,398,114 + BWI76_RS21020 0.36 +0.1
4,398,155 - BWI76_RS21020 0.40 -0.1
4,398,169 + BWI76_RS21020 0.41 +0.4
4,398,197 + BWI76_RS21020 0.43 +0.3
4,398,205 - BWI76_RS21020 0.44 +0.5
4,398,216 + BWI76_RS21020 0.45 +2.6
4,398,224 - BWI76_RS21020 0.45 +0.3
4,398,224 - BWI76_RS21020 0.45 -1.0
4,398,490 - +1.0
4,398,505 - BWI76_RS21020 0.69 +0.3
4,398,562 - BWI76_RS21020 0.74 -0.7
4,398,562 - BWI76_RS21020 0.74 +1.6
4,398,632 - BWI76_RS21020 0.80 -0.3
4,401,241 - BWI76_RS21030 0.38 -1.4

Or see this region's nucleotide sequence