Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19280

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19275 and BWI76_RS19280 are separated by 292 nucleotidesBWI76_RS19280 and BWI76_RS19285 are separated by 244 nucleotides BWI76_RS19275: BWI76_RS19275 - DNA-binding response regulator, at 4,015,488 to 4,016,210 _RS19275 BWI76_RS19280: BWI76_RS19280 - U32 family peptidase, at 4,016,503 to 4,017,864 _RS19280 BWI76_RS19285: BWI76_RS19285 - lipid kinase YegS, at 4,018,109 to 4,019,002 _RS19285 Position (kb) 4016 4017 4018Strain fitness (log2 ratio) -2 -1 0 1 2at 4015.803 kb on + strand, within BWI76_RS19275at 4015.817 kb on + strand, within BWI76_RS19275at 4015.867 kb on + strand, within BWI76_RS19275at 4016.167 kb on + strandat 4016.168 kb on - strandat 4016.435 kb on - strandat 4016.454 kb on - strandat 4016.481 kb on - strandat 4016.581 kb on + strandat 4016.685 kb on - strand, within BWI76_RS19280at 4016.720 kb on - strand, within BWI76_RS19280at 4016.856 kb on + strand, within BWI76_RS19280at 4016.856 kb on + strand, within BWI76_RS19280at 4017.009 kb on + strand, within BWI76_RS19280at 4017.553 kb on + strand, within BWI76_RS19280at 4017.730 kb on + strandat 4017.767 kb on + strandat 4017.840 kb on - strandat 4017.994 kb on + strandat 4018.002 kb on - strandat 4018.073 kb on + strandat 4018.325 kb on - strand, within BWI76_RS19285at 4018.446 kb on + strand, within BWI76_RS19285at 4018.494 kb on - strand, within BWI76_RS19285at 4018.631 kb on - strand, within BWI76_RS19285at 4018.687 kb on - strand, within BWI76_RS19285at 4018.797 kb on + strand, within BWI76_RS19285at 4018.797 kb on + strand, within BWI76_RS19285at 4018.805 kb on - strand, within BWI76_RS19285at 4018.805 kb on - strand, within BWI76_RS19285at 4018.805 kb on - strand, within BWI76_RS19285at 4018.815 kb on - strand, within BWI76_RS19285at 4018.815 kb on - strand, within BWI76_RS19285

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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4,015,803 + BWI76_RS19275 0.44 -0.5
4,015,817 + BWI76_RS19275 0.46 +0.1
4,015,867 + BWI76_RS19275 0.52 +0.6
4,016,167 + -2.0
4,016,168 - +2.6
4,016,435 - -0.1
4,016,454 - -1.0
4,016,481 - +0.9
4,016,581 + +1.9
4,016,685 - BWI76_RS19280 0.13 -1.1
4,016,720 - BWI76_RS19280 0.16 -0.6
4,016,856 + BWI76_RS19280 0.26 -1.6
4,016,856 + BWI76_RS19280 0.26 -0.1
4,017,009 + BWI76_RS19280 0.37 -0.7
4,017,553 + BWI76_RS19280 0.77 -0.1
4,017,730 + -0.1
4,017,767 + +0.3
4,017,840 - -1.3
4,017,994 + -0.5
4,018,002 - -0.0
4,018,073 + -0.1
4,018,325 - BWI76_RS19285 0.24 +0.8
4,018,446 + BWI76_RS19285 0.38 -0.1
4,018,494 - BWI76_RS19285 0.43 +0.4
4,018,631 - BWI76_RS19285 0.58 +0.7
4,018,687 - BWI76_RS19285 0.65 -0.1
4,018,797 + BWI76_RS19285 0.77 -0.7
4,018,797 + BWI76_RS19285 0.77 -0.7
4,018,805 - BWI76_RS19285 0.78 +1.8
4,018,805 - BWI76_RS19285 0.78 -0.0
4,018,805 - BWI76_RS19285 0.78 -1.7
4,018,815 - BWI76_RS19285 0.79 -1.2
4,018,815 - BWI76_RS19285 0.79 -0.9

Or see this region's nucleotide sequence