Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14525 and BWI76_RS14530 are separated by 182 nucleotides BWI76_RS14530 and BWI76_RS14535 are separated by 86 nucleotides
BWI76_RS14525: BWI76_RS14525 - AraC family transcriptional regulator, at 3,034,876 to 3,035,835
_RS14525
BWI76_RS14530: BWI76_RS14530 - non-ribosomal peptide synthetase, at 3,036,018 to 3,042,116
_RS14530
BWI76_RS14535: BWI76_RS14535 - polyketide synthase, at 3,042,203 to 3,051,679
_RS14535
Position (kb)
3036
3037
3038
3039
3040
3041
3042
3043 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3035.061 kb on + strand, within BWI76_RS14525 at 3035.205 kb on - strand, within BWI76_RS14525 at 3035.230 kb on - strand, within BWI76_RS14525 at 3035.456 kb on + strand, within BWI76_RS14525 at 3035.754 kb on - strand at 3035.754 kb on - strand at 3036.162 kb on + strand at 3036.170 kb on - strand at 3036.170 kb on - strand at 3036.808 kb on - strand, within BWI76_RS14530 at 3037.203 kb on - strand, within BWI76_RS14530 at 3037.410 kb on + strand, within BWI76_RS14530 at 3037.418 kb on - strand, within BWI76_RS14530 at 3037.468 kb on + strand, within BWI76_RS14530 at 3037.902 kb on - strand, within BWI76_RS14530 at 3037.921 kb on - strand, within BWI76_RS14530 at 3037.931 kb on + strand, within BWI76_RS14530 at 3038.152 kb on + strand, within BWI76_RS14530 at 3038.205 kb on - strand, within BWI76_RS14530 at 3038.247 kb on + strand at 3038.259 kb on + strand, within BWI76_RS14530 at 3038.336 kb on + strand, within BWI76_RS14530 at 3038.344 kb on - strand, within BWI76_RS14530 at 3038.575 kb on - strand, within BWI76_RS14530 at 3038.609 kb on - strand, within BWI76_RS14530 at 3038.706 kb on + strand, within BWI76_RS14530 at 3038.903 kb on + strand, within BWI76_RS14530 at 3039.485 kb on - strand, within BWI76_RS14530 at 3039.616 kb on + strand, within BWI76_RS14530 at 3039.716 kb on + strand, within BWI76_RS14530 at 3039.851 kb on + strand, within BWI76_RS14530 at 3039.893 kb on + strand, within BWI76_RS14530 at 3039.946 kb on + strand, within BWI76_RS14530 at 3040.416 kb on - strand, within BWI76_RS14530 at 3040.447 kb on - strand, within BWI76_RS14530 at 3040.721 kb on + strand, within BWI76_RS14530 at 3041.161 kb on + strand, within BWI76_RS14530 at 3041.484 kb on + strand, within BWI76_RS14530 at 3041.578 kb on - strand at 3041.591 kb on + strand at 3041.697 kb on - strand at 3041.716 kb on + strand at 3041.999 kb on + strand at 3042.461 kb on + strand at 3042.688 kb on + strand at 3042.688 kb on + strand at 3042.696 kb on - strand at 3042.785 kb on - strand at 3042.836 kb on - strand at 3042.962 kb on - strand at 3043.110 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 3,035,061 + BWI76_RS14525 0.19 -0.7 3,035,205 - BWI76_RS14525 0.34 -0.3 3,035,230 - BWI76_RS14525 0.37 +0.2 3,035,456 + BWI76_RS14525 0.60 +1.2 3,035,754 - +0.8 3,035,754 - +0.3 3,036,162 + +1.0 3,036,170 - -0.5 3,036,170 - +1.7 3,036,808 - BWI76_RS14530 0.13 +0.8 3,037,203 - BWI76_RS14530 0.19 -0.2 3,037,410 + BWI76_RS14530 0.23 +1.7 3,037,418 - BWI76_RS14530 0.23 +0.1 3,037,468 + BWI76_RS14530 0.24 -0.1 3,037,902 - BWI76_RS14530 0.31 +1.0 3,037,921 - BWI76_RS14530 0.31 -0.3 3,037,931 + BWI76_RS14530 0.31 +1.2 3,038,152 + BWI76_RS14530 0.35 -1.8 3,038,205 - BWI76_RS14530 0.36 +0.1 3,038,247 + +3.7 3,038,259 + BWI76_RS14530 0.37 -0.2 3,038,336 + BWI76_RS14530 0.38 +0.2 3,038,344 - BWI76_RS14530 0.38 +1.0 3,038,575 - BWI76_RS14530 0.42 +0.2 3,038,609 - BWI76_RS14530 0.42 +0.9 3,038,706 + BWI76_RS14530 0.44 +0.0 3,038,903 + BWI76_RS14530 0.47 -0.8 3,039,485 - BWI76_RS14530 0.57 +2.1 3,039,616 + BWI76_RS14530 0.59 +0.1 3,039,716 + BWI76_RS14530 0.61 -0.5 3,039,851 + BWI76_RS14530 0.63 +0.8 3,039,893 + BWI76_RS14530 0.64 +1.2 3,039,946 + BWI76_RS14530 0.64 +0.9 3,040,416 - BWI76_RS14530 0.72 +0.3 3,040,447 - BWI76_RS14530 0.73 -0.3 3,040,721 + BWI76_RS14530 0.77 +1.1 3,041,161 + BWI76_RS14530 0.84 +0.3 3,041,484 + BWI76_RS14530 0.90 -1.6 3,041,578 - -0.3 3,041,591 + +0.2 3,041,697 - +0.2 3,041,716 + +0.4 3,041,999 + +0.3 3,042,461 + +0.3 3,042,688 + +0.2 3,042,688 + +0.2 3,042,696 - -0.8 3,042,785 - -0.2 3,042,836 - +0.9 3,042,962 - +0.6 3,043,110 - +0.0
Or see this region's nucleotide sequence