Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11125 and BWI76_RS11130 are separated by 297 nucleotides BWI76_RS11130 and BWI76_RS11135 are separated by 102 nucleotides
BWI76_RS11125: BWI76_RS11125 - metal-dependent hydrolase, at 2,345,469 to 2,346,263
_RS11125
BWI76_RS11130: BWI76_RS11130 - PTS glucose transporter subunit IIBC, at 2,346,561 to 2,347,994
_RS11130
BWI76_RS11135: BWI76_RS11135 - ferric-rhodotorulic acid/ferric-coprogen receptor FhuE, at 2,348,097 to 2,350,283
_RS11135
Position (kb)
2346
2347
2348 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2346.003 kb on + strand, within BWI76_RS11125 at 2346.283 kb on - strand at 2346.475 kb on + strand at 2346.725 kb on - strand, within BWI76_RS11130 at 2346.881 kb on - strand, within BWI76_RS11130 at 2347.171 kb on + strand, within BWI76_RS11130 at 2347.272 kb on - strand, within BWI76_RS11130 at 2347.279 kb on + strand, within BWI76_RS11130 at 2347.442 kb on - strand, within BWI76_RS11130 at 2347.518 kb on + strand, within BWI76_RS11130 at 2347.526 kb on - strand, within BWI76_RS11130 at 2347.736 kb on - strand, within BWI76_RS11130 at 2348.199 kb on - strand at 2348.210 kb on - strand at 2348.255 kb on + strand at 2348.408 kb on + strand, within BWI76_RS11135 at 2348.416 kb on - strand, within BWI76_RS11135 at 2348.416 kb on - strand, within BWI76_RS11135 at 2348.467 kb on - strand, within BWI76_RS11135 at 2348.748 kb on + strand, within BWI76_RS11135 at 2348.765 kb on - strand, within BWI76_RS11135
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 2,346,003 + BWI76_RS11125 0.67 -0.0 2,346,283 - +0.1 2,346,475 + -0.6 2,346,725 - BWI76_RS11130 0.11 +1.9 2,346,881 - BWI76_RS11130 0.22 +3.3 2,347,171 + BWI76_RS11130 0.43 +1.5 2,347,272 - BWI76_RS11130 0.50 +2.2 2,347,279 + BWI76_RS11130 0.50 +2.1 2,347,442 - BWI76_RS11130 0.61 +2.1 2,347,518 + BWI76_RS11130 0.67 +2.2 2,347,526 - BWI76_RS11130 0.67 +0.9 2,347,736 - BWI76_RS11130 0.82 +1.3 2,348,199 - -0.1 2,348,210 - +1.9 2,348,255 + +0.4 2,348,408 + BWI76_RS11135 0.14 -2.3 2,348,416 - BWI76_RS11135 0.15 -2.3 2,348,416 - BWI76_RS11135 0.15 -2.2 2,348,467 - BWI76_RS11135 0.17 +1.3 2,348,748 + BWI76_RS11135 0.30 -0.8 2,348,765 - BWI76_RS11135 0.31 +0.3
Or see this region's nucleotide sequence