Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07315
Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,539,827 | + | BWI76_RS07310 | 0.51 | +0.8 | |
1,539,831 | - | BWI76_RS07310 | 0.51 | -2.4 | |
1,539,855 | + | BWI76_RS07310 | 0.53 | -0.2 | |
1,539,958 | - | BWI76_RS07310 | 0.60 | -0.0 | |
1,540,172 | + | BWI76_RS07310 | 0.75 | +0.2 | |
1,540,523 | - | -0.8 | |||
1,540,523 | - | +0.2 | |||
1,540,594 | + | -2.2 | |||
1,540,662 | + | BWI76_RS07315 | 0.11 | +0.2 | |
1,540,662 | + | BWI76_RS07315 | 0.11 | +1.3 | |
1,540,662 | + | BWI76_RS07315 | 0.11 | -0.8 | |
1,540,774 | - | BWI76_RS07315 | 0.19 | +0.5 | |
1,540,847 | + | BWI76_RS07315 | 0.24 | -0.1 | |
1,540,855 | - | BWI76_RS07315 | 0.25 | -1.6 | |
1,540,992 | - | BWI76_RS07315 | 0.35 | -0.8 | |
1,541,183 | - | BWI76_RS07315 | 0.49 | +0.0 | |
1,541,310 | - | BWI76_RS07315 | 0.58 | -0.6 | |
1,541,316 | - | BWI76_RS07315 | 0.58 | -0.3 | |
1,542,238 | - | BWI76_RS07320 | 0.14 | -0.1 | |
1,542,384 | + | BWI76_RS07320 | 0.24 | +1.1 | |
1,542,441 | + | BWI76_RS07320 | 0.27 | -0.0 | |
1,542,441 | + | BWI76_RS07320 | 0.27 | +1.9 | |
1,542,536 | + | BWI76_RS07320 | 0.34 | +0.4 | |
1,542,536 | + | BWI76_RS07320 | 0.34 | -2.1 | |
1,542,536 | + | +3.6 | |||
1,542,536 | - | BWI76_RS07320 | 0.34 | +0.3 | |
1,542,544 | - | BWI76_RS07320 | 0.34 | +0.2 | |
1,542,748 | - | BWI76_RS07320 | 0.48 | -3.1 |
Or see this region's nucleotide sequence