Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06750 and BWI76_RS06755 overlap by 26 nucleotides BWI76_RS06755 and BWI76_RS06760 are separated by 126 nucleotides BWI76_RS06760 and BWI76_RS06765 are separated by 161 nucleotides
BWI76_RS06750: BWI76_RS06750 - GntR family transcriptional regulator with, at 1,415,001 to 1,416,455
_RS06750
BWI76_RS06755: BWI76_RS06755 - sigma factor YlaC, at 1,416,430 to 1,416,900
_RS06755
BWI76_RS06760: BWI76_RS06760 - maltose O-acetyltransferase, at 1,417,027 to 1,417,593
_RS06760
BWI76_RS06765: BWI76_RS06765 - transcriptional regulator, at 1,417,755 to 1,417,973
_RS06765
Position (kb)
1416
1417 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 1415.536 kb on - strand, within BWI76_RS06750 at 1415.548 kb on + strand, within BWI76_RS06750 at 1415.604 kb on + strand, within BWI76_RS06750 at 1415.612 kb on - strand, within BWI76_RS06750 at 1415.737 kb on + strand, within BWI76_RS06750 at 1415.802 kb on + strand, within BWI76_RS06750 at 1415.877 kb on + strand, within BWI76_RS06750 at 1415.885 kb on - strand, within BWI76_RS06750 at 1415.916 kb on - strand, within BWI76_RS06750 at 1416.071 kb on + strand, within BWI76_RS06750 at 1416.366 kb on + strand at 1416.366 kb on + strand at 1416.668 kb on - strand, within BWI76_RS06755 at 1416.747 kb on + strand, within BWI76_RS06755 at 1416.755 kb on - strand at 1416.755 kb on - strand, within BWI76_RS06755 at 1416.767 kb on + strand, within BWI76_RS06755 at 1417.026 kb on - strand at 1417.093 kb on - strand, within BWI76_RS06760 at 1417.165 kb on - strand, within BWI76_RS06760 at 1417.196 kb on - strand, within BWI76_RS06760 at 1417.227 kb on - strand, within BWI76_RS06760 at 1417.290 kb on + strand, within BWI76_RS06760 at 1417.297 kb on - strand, within BWI76_RS06760 at 1417.408 kb on + strand, within BWI76_RS06760 at 1417.503 kb on - strand, within BWI76_RS06760 at 1417.503 kb on - strand, within BWI76_RS06760 at 1417.511 kb on + strand, within BWI76_RS06760 at 1417.526 kb on + strand, within BWI76_RS06760 at 1417.534 kb on - strand, within BWI76_RS06760 at 1417.537 kb on + strand at 1417.555 kb on - strand at 1417.555 kb on - strand at 1417.589 kb on + strand at 1417.599 kb on - strand at 1417.674 kb on - strand at 1417.691 kb on + strand at 1417.691 kb on - strand at 1417.691 kb on - strand at 1417.691 kb on - strand at 1417.697 kb on - strand at 1417.702 kb on - strand at 1417.767 kb on + strand at 1417.788 kb on - strand, within BWI76_RS06765 at 1417.791 kb on + strand, within BWI76_RS06765 at 1417.848 kb on - strand, within BWI76_RS06765
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 1,415,536 - BWI76_RS06750 0.37 -0.5 1,415,548 + BWI76_RS06750 0.38 +0.1 1,415,604 + BWI76_RS06750 0.41 -0.3 1,415,612 - BWI76_RS06750 0.42 +1.1 1,415,737 + BWI76_RS06750 0.51 +0.5 1,415,802 + BWI76_RS06750 0.55 -0.5 1,415,877 + BWI76_RS06750 0.60 -0.0 1,415,885 - BWI76_RS06750 0.61 +1.3 1,415,916 - BWI76_RS06750 0.63 -1.6 1,416,071 + BWI76_RS06750 0.74 +0.1 1,416,366 + -0.3 1,416,366 + -0.4 1,416,668 - BWI76_RS06755 0.51 +6.0 1,416,747 + BWI76_RS06755 0.67 +5.5 1,416,755 - +4.2 1,416,755 - BWI76_RS06755 0.69 +6.2 1,416,767 + BWI76_RS06755 0.72 +5.8 1,417,026 - +1.6 1,417,093 - BWI76_RS06760 0.12 -0.4 1,417,165 - BWI76_RS06760 0.24 -0.6 1,417,196 - BWI76_RS06760 0.30 -0.8 1,417,227 - BWI76_RS06760 0.35 +0.4 1,417,290 + BWI76_RS06760 0.46 -0.7 1,417,297 - BWI76_RS06760 0.48 -0.3 1,417,408 + BWI76_RS06760 0.67 -1.7 1,417,503 - BWI76_RS06760 0.84 +0.8 1,417,503 - BWI76_RS06760 0.84 -0.1 1,417,511 + BWI76_RS06760 0.85 -1.9 1,417,526 + BWI76_RS06760 0.88 -0.5 1,417,534 - BWI76_RS06760 0.89 +0.7 1,417,537 + +0.2 1,417,555 - +0.4 1,417,555 - -1.1 1,417,589 + -1.1 1,417,599 - -1.7 1,417,674 - -0.6 1,417,691 + -1.2 1,417,691 - +0.9 1,417,691 - +0.1 1,417,691 - +0.3 1,417,697 - -0.4 1,417,702 - -0.6 1,417,767 + -1.3 1,417,788 - BWI76_RS06765 0.15 -0.3 1,417,791 + BWI76_RS06765 0.16 -1.2 1,417,848 - BWI76_RS06765 0.42 +0.1
Or see this region's nucleotide sequence