Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05550 and BWI76_RS05555 are separated by 57 nucleotides BWI76_RS05555 and BWI76_RS05560 are separated by 76 nucleotides BWI76_RS05560 and BWI76_RS05565 are separated by 2 nucleotides
BWI76_RS05550: BWI76_RS05550 - fermentation/respiration switch protein, at 1,162,885 to 1,164,129
_RS05550
BWI76_RS05555: BWI76_RS05555 - Crl family RNA polymerase assembly factor, at 1,164,187 to 1,164,585
_RS05555
BWI76_RS05560: BWI76_RS05560 - serine acetyltransferase, at 1,164,662 to 1,165,168
_RS05560
BWI76_RS05565: BWI76_RS05565 - beta-galactosidase, at 1,165,171 to 1,166,589
_RS05565
Position (kb) 1164
1165
1166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1163.768 kb on + strand, within BWI76_RS05550 at 1163.776 kb on - strand, within BWI76_RS05550 at 1163.776 kb on - strand, within BWI76_RS05550 at 1163.928 kb on - strand, within BWI76_RS05550 at 1163.958 kb on + strand, within BWI76_RS05550 at 1164.077 kb on - strand at 1164.121 kb on - strand at 1164.167 kb on - strand at 1164.198 kb on - strand at 1164.207 kb on + strand at 1164.207 kb on + strand at 1164.215 kb on - strand at 1164.296 kb on + strand, within BWI76_RS05555 at 1164.396 kb on - strand, within BWI76_RS05555 at 1165.323 kb on - strand, within BWI76_RS05565 at 1165.330 kb on + strand, within BWI76_RS05565 at 1165.348 kb on - strand, within BWI76_RS05565 at 1165.348 kb on - strand, within BWI76_RS05565 at 1165.383 kb on + strand, within BWI76_RS05565 at 1165.614 kb on + strand, within BWI76_RS05565 at 1165.616 kb on + strand, within BWI76_RS05565 at 1165.616 kb on + strand, within BWI76_RS05565 at 1165.652 kb on + strand, within BWI76_RS05565 at 1165.659 kb on - strand, within BWI76_RS05565 at 1165.670 kb on + strand, within BWI76_RS05565 at 1165.678 kb on - strand, within BWI76_RS05565 at 1165.849 kb on - strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.880 kb on + strand, within BWI76_RS05565 at 1165.937 kb on + strand, within BWI76_RS05565
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 1,163,768 + BWI76_RS05550 0.71 +1.2 1,163,776 - BWI76_RS05550 0.72 -1.1 1,163,776 - BWI76_RS05550 0.72 +0.2 1,163,928 - BWI76_RS05550 0.84 -0.2 1,163,958 + BWI76_RS05550 0.86 -0.2 1,164,077 - -2.2 1,164,121 - +0.3 1,164,167 - +1.0 1,164,198 - -1.0 1,164,207 + -2.4 1,164,207 + -0.2 1,164,215 - -1.4 1,164,296 + BWI76_RS05555 0.27 -1.1 1,164,396 - BWI76_RS05555 0.52 +0.1 1,165,323 - BWI76_RS05565 0.11 +1.8 1,165,330 + BWI76_RS05565 0.11 +0.5 1,165,348 - BWI76_RS05565 0.12 +0.4 1,165,348 - BWI76_RS05565 0.12 +0.1 1,165,383 + BWI76_RS05565 0.15 +0.6 1,165,614 + BWI76_RS05565 0.31 +0.1 1,165,616 + BWI76_RS05565 0.31 +2.0 1,165,616 + BWI76_RS05565 0.31 +0.8 1,165,652 + BWI76_RS05565 0.34 +0.4 1,165,659 - BWI76_RS05565 0.34 +0.3 1,165,670 + BWI76_RS05565 0.35 +0.0 1,165,678 - BWI76_RS05565 0.36 -1.1 1,165,849 - BWI76_RS05565 0.48 +0.3 1,165,880 + BWI76_RS05565 0.50 +0.5 1,165,880 + BWI76_RS05565 0.50 +0.2 1,165,880 + BWI76_RS05565 0.50 +0.1 1,165,937 + BWI76_RS05565 0.54 -0.8
Or see this region's nucleotide sequence