Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04690 and BWI76_RS04695 are separated by 391 nucleotides BWI76_RS04695 and BWI76_RS04700 are separated by 2 nucleotides BWI76_RS04700 and BWI76_RS04705 are separated by 180 nucleotides
BWI76_RS04690: BWI76_RS04690 - transcriptional regulator LeuO, at 978,554 to 979,504
_RS04690
BWI76_RS04695: BWI76_RS04695 - acetolactate synthase 3 large subunit, at 979,896 to 981,620
_RS04695
BWI76_RS04700: BWI76_RS04700 - acetolactate synthase small subunit, at 981,623 to 982,114
_RS04700
BWI76_RS04705: BWI76_RS04705 - DNA-binding transcriptional regulator FruR, at 982,295 to 983,299
_RS04705
Position (kb) 979
980
981
982 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 978.918 kb on - strand, within BWI76_RS04690 at 978.920 kb on + strand, within BWI76_RS04690 at 978.925 kb on + strand, within BWI76_RS04690 at 978.967 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 978.986 kb on - strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.059 kb on + strand, within BWI76_RS04690 at 979.062 kb on + strand, within BWI76_RS04690 at 979.067 kb on + strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.067 kb on - strand, within BWI76_RS04690 at 979.075 kb on - strand, within BWI76_RS04690 at 979.078 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.082 kb on + strand, within BWI76_RS04690 at 979.085 kb on - strand, within BWI76_RS04690 at 979.090 kb on - strand, within BWI76_RS04690 at 979.090 kb on - strand, within BWI76_RS04690 at 979.117 kb on + strand, within BWI76_RS04690 at 979.117 kb on + strand, within BWI76_RS04690 at 979.131 kb on + strand, within BWI76_RS04690 at 979.139 kb on - strand, within BWI76_RS04690 at 979.147 kb on - strand, within BWI76_RS04690 at 979.149 kb on + strand, within BWI76_RS04690 at 979.149 kb on + strand, within BWI76_RS04690 at 979.157 kb on - strand, within BWI76_RS04690 at 979.186 kb on + strand, within BWI76_RS04690 at 979.187 kb on - strand, within BWI76_RS04690 at 979.203 kb on + strand, within BWI76_RS04690 at 979.205 kb on + strand, within BWI76_RS04690 at 979.219 kb on - strand, within BWI76_RS04690 at 979.229 kb on - strand, within BWI76_RS04690 at 979.231 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand, within BWI76_RS04690 at 979.237 kb on + strand at 979.239 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.245 kb on - strand, within BWI76_RS04690 at 979.256 kb on - strand, within BWI76_RS04690 at 979.262 kb on + strand, within BWI76_RS04690 at 979.276 kb on + strand, within BWI76_RS04690 at 979.276 kb on + strand, within BWI76_RS04690 at 979.288 kb on + strand, within BWI76_RS04690 at 979.310 kb on + strand, within BWI76_RS04690 at 979.318 kb on - strand, within BWI76_RS04690 at 979.320 kb on + strand, within BWI76_RS04690 at 979.323 kb on - strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.329 kb on + strand, within BWI76_RS04690 at 979.334 kb on + strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.337 kb on - strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.339 kb on + strand, within BWI76_RS04690 at 979.342 kb on - strand, within BWI76_RS04690 at 979.344 kb on + strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.347 kb on - strand, within BWI76_RS04690 at 979.390 kb on - strand, within BWI76_RS04690 at 979.410 kb on + strand at 979.430 kb on - strand at 979.430 kb on - strand at 979.439 kb on - strand at 979.446 kb on + strand at 979.450 kb on + strand at 979.451 kb on + strand at 979.457 kb on + strand at 979.457 kb on + strand at 979.457 kb on + strand at 979.459 kb on - strand at 979.507 kb on - strand at 979.525 kb on + strand at 979.527 kb on - strand at 979.533 kb on - strand at 979.535 kb on - strand at 979.577 kb on - strand at 979.593 kb on + strand at 979.694 kb on + strand at 979.701 kb on + strand at 979.701 kb on + strand at 979.702 kb on - strand at 979.702 kb on - strand at 979.702 kb on - strand at 979.709 kb on + strand at 979.709 kb on + strand at 979.714 kb on + strand at 979.717 kb on - strand at 979.731 kb on + strand at 979.731 kb on + strand at 979.739 kb on - strand at 979.739 kb on - strand at 979.748 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.777 kb on + strand at 979.784 kb on - strand at 979.784 kb on - strand at 979.784 kb on - strand at 979.785 kb on - strand at 979.785 kb on - strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.798 kb on + strand at 979.805 kb on + strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.806 kb on - strand at 979.810 kb on + strand at 979.835 kb on + strand at 979.839 kb on - strand at 979.909 kb on - strand at 979.958 kb on + strand at 980.009 kb on - strand at 980.114 kb on - strand, within BWI76_RS04695 at 980.119 kb on - strand, within BWI76_RS04695 at 980.119 kb on - strand, within BWI76_RS04695 at 980.446 kb on + strand, within BWI76_RS04695 at 980.488 kb on - strand, within BWI76_RS04695 at 980.488 kb on - strand, within BWI76_RS04695 at 980.578 kb on - strand, within BWI76_RS04695 at 980.581 kb on - strand, within BWI76_RS04695 at 980.598 kb on - strand, within BWI76_RS04695 at 980.693 kb on + strand at 980.695 kb on + strand, within BWI76_RS04695 at 980.773 kb on + strand, within BWI76_RS04695 at 980.801 kb on - strand, within BWI76_RS04695 at 980.887 kb on + strand at 980.981 kb on - strand, within BWI76_RS04695 at 981.034 kb on - strand, within BWI76_RS04695 at 981.087 kb on + strand, within BWI76_RS04695 at 981.107 kb on + strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.115 kb on - strand, within BWI76_RS04695 at 981.274 kb on - strand, within BWI76_RS04695 at 981.303 kb on + strand, within BWI76_RS04695 at 981.351 kb on + strand, within BWI76_RS04695 at 981.364 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.388 kb on - strand, within BWI76_RS04695 at 981.542 kb on - strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.551 kb on + strand at 981.559 kb on - strand at 981.593 kb on - strand at 981.617 kb on - strand at 981.665 kb on + strand at 981.801 kb on + strand, within BWI76_RS04700 at 981.884 kb on - strand, within BWI76_RS04700 at 982.063 kb on + strand, within BWI76_RS04700 at 982.068 kb on + strand at 982.222 kb on + strand at 982.222 kb on + strand at 982.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 978,918 - BWI76_RS04690 0.38 -1.0 978,920 + BWI76_RS04690 0.38 -1.0 978,925 + BWI76_RS04690 0.39 +1.9 978,967 - BWI76_RS04690 0.43 +0.4 978,986 - BWI76_RS04690 0.45 +0.6 978,986 - BWI76_RS04690 0.45 -0.8 978,986 - BWI76_RS04690 0.45 +2.6 979,059 + BWI76_RS04690 0.53 -0.0 979,059 + BWI76_RS04690 0.53 -0.0 979,059 + BWI76_RS04690 0.53 +0.2 979,059 + BWI76_RS04690 0.53 -0.6 979,059 + BWI76_RS04690 0.53 -1.1 979,059 + BWI76_RS04690 0.53 +1.0 979,062 + BWI76_RS04690 0.53 -0.8 979,067 + BWI76_RS04690 0.54 -0.6 979,067 - BWI76_RS04690 0.54 -0.4 979,067 - BWI76_RS04690 0.54 -1.1 979,067 - BWI76_RS04690 0.54 -2.3 979,067 - BWI76_RS04690 0.54 +1.7 979,067 - BWI76_RS04690 0.54 +2.0 979,067 - BWI76_RS04690 0.54 -0.6 979,067 - BWI76_RS04690 0.54 +3.0 979,075 - BWI76_RS04690 0.55 +1.6 979,078 + BWI76_RS04690 0.55 +0.1 979,082 + BWI76_RS04690 0.56 -0.5 979,082 + BWI76_RS04690 0.56 +0.3 979,082 + BWI76_RS04690 0.56 -0.6 979,082 + BWI76_RS04690 0.56 +0.4 979,082 + BWI76_RS04690 0.56 -0.3 979,082 + BWI76_RS04690 0.56 -0.8 979,082 + BWI76_RS04690 0.56 +0.4 979,082 + BWI76_RS04690 0.56 +0.8 979,082 + BWI76_RS04690 0.56 +0.4 979,082 + BWI76_RS04690 0.56 -1.2 979,082 + BWI76_RS04690 0.56 -0.5 979,082 + BWI76_RS04690 0.56 +0.2 979,082 + BWI76_RS04690 0.56 +0.5 979,082 + BWI76_RS04690 0.56 -0.2 979,082 + BWI76_RS04690 0.56 +0.6 979,085 - BWI76_RS04690 0.56 -1.8 979,090 - BWI76_RS04690 0.56 +0.4 979,090 - BWI76_RS04690 0.56 -1.3 979,117 + BWI76_RS04690 0.59 -2.4 979,117 + BWI76_RS04690 0.59 -1.0 979,131 + BWI76_RS04690 0.61 -0.7 979,139 - BWI76_RS04690 0.62 -1.8 979,147 - BWI76_RS04690 0.62 +0.6 979,149 + BWI76_RS04690 0.63 -0.6 979,149 + BWI76_RS04690 0.63 -0.3 979,157 - BWI76_RS04690 0.63 -0.2 979,186 + BWI76_RS04690 0.66 -1.3 979,187 - BWI76_RS04690 0.67 -1.1 979,203 + BWI76_RS04690 0.68 -1.5 979,205 + BWI76_RS04690 0.68 -0.1 979,219 - BWI76_RS04690 0.70 -0.6 979,229 - BWI76_RS04690 0.71 +0.6 979,231 + BWI76_RS04690 0.71 -0.1 979,237 + BWI76_RS04690 0.72 -0.1 979,237 + BWI76_RS04690 0.72 -0.5 979,237 + +1.6 979,239 - BWI76_RS04690 0.72 -1.1 979,245 - BWI76_RS04690 0.73 -1.5 979,245 - BWI76_RS04690 0.73 -1.2 979,245 - BWI76_RS04690 0.73 -0.6 979,245 - BWI76_RS04690 0.73 +0.4 979,245 - BWI76_RS04690 0.73 -1.2 979,256 - BWI76_RS04690 0.74 -0.4 979,262 + BWI76_RS04690 0.74 -1.8 979,276 + BWI76_RS04690 0.76 +0.1 979,276 + BWI76_RS04690 0.76 +0.1 979,288 + BWI76_RS04690 0.77 -0.9 979,310 + BWI76_RS04690 0.79 +0.2 979,318 - BWI76_RS04690 0.80 -0.4 979,320 + BWI76_RS04690 0.81 -0.5 979,323 - BWI76_RS04690 0.81 -1.1 979,329 + BWI76_RS04690 0.81 +0.2 979,329 + BWI76_RS04690 0.81 +0.1 979,329 + BWI76_RS04690 0.81 -0.4 979,329 + BWI76_RS04690 0.81 +0.1 979,329 + BWI76_RS04690 0.81 +0.2 979,329 + BWI76_RS04690 0.81 -0.6 979,334 + BWI76_RS04690 0.82 +0.9 979,337 - BWI76_RS04690 0.82 -0.3 979,337 - BWI76_RS04690 0.82 -1.8 979,337 - BWI76_RS04690 0.82 +0.6 979,337 - BWI76_RS04690 0.82 +0.3 979,337 - BWI76_RS04690 0.82 -0.8 979,339 + BWI76_RS04690 0.83 +0.5 979,339 + BWI76_RS04690 0.83 -0.2 979,339 + BWI76_RS04690 0.83 +0.9 979,342 - BWI76_RS04690 0.83 -1.8 979,344 + BWI76_RS04690 0.83 +1.1 979,347 - BWI76_RS04690 0.83 -1.6 979,347 - BWI76_RS04690 0.83 -0.2 979,347 - BWI76_RS04690 0.83 -3.3 979,390 - BWI76_RS04690 0.88 -0.1 979,410 + -0.1 979,430 - -2.1 979,430 - +1.2 979,439 - -1.2 979,446 + -0.5 979,450 + -0.6 979,451 + -1.3 979,457 + -0.5 979,457 + -0.1 979,457 + +0.5 979,459 - -0.5 979,507 - +1.4 979,525 + -0.0 979,527 - +0.1 979,533 - -0.4 979,535 - -0.6 979,577 - -0.4 979,593 + +1.3 979,694 + +1.0 979,701 + -1.6 979,701 + +0.2 979,702 - +0.7 979,702 - -0.2 979,702 - -0.0 979,709 + -0.5 979,709 + -0.6 979,714 + -0.4 979,717 - +2.8 979,731 + -2.2 979,731 + -0.4 979,739 - +1.8 979,739 - +0.5 979,748 + -1.0 979,777 + +0.4 979,777 + +0.5 979,777 + +0.8 979,777 + +2.1 979,784 - +0.3 979,784 - +0.0 979,784 - -0.2 979,785 - +0.5 979,785 - -0.3 979,798 + +0.2 979,798 + +0.2 979,798 + -1.8 979,798 + +0.4 979,798 + -0.3 979,798 + +0.5 979,798 + +0.0 979,798 + -1.1 979,805 + -0.1 979,806 - -0.0 979,806 - -0.9 979,806 - +1.9 979,806 - -2.4 979,810 + -0.2 979,835 + +0.7 979,839 - -0.7 979,909 - -1.4 979,958 + -1.9 980,009 - -0.8 980,114 - BWI76_RS04695 0.13 -0.4 980,119 - BWI76_RS04695 0.13 +0.3 980,119 - BWI76_RS04695 0.13 +0.2 980,446 + BWI76_RS04695 0.32 +0.3 980,488 - BWI76_RS04695 0.34 -0.6 980,488 - BWI76_RS04695 0.34 +1.8 980,578 - BWI76_RS04695 0.40 -1.4 980,581 - BWI76_RS04695 0.40 +0.4 980,598 - BWI76_RS04695 0.41 -0.3 980,693 + +1.0 980,695 + BWI76_RS04695 0.46 +0.3 980,773 + BWI76_RS04695 0.51 -0.3 980,801 - BWI76_RS04695 0.52 +0.1 980,887 + +1.0 980,981 - BWI76_RS04695 0.63 -0.3 981,034 - BWI76_RS04695 0.66 -0.2 981,087 + BWI76_RS04695 0.69 +0.8 981,107 + BWI76_RS04695 0.70 -2.2 981,115 - BWI76_RS04695 0.71 -0.2 981,115 - BWI76_RS04695 0.71 +0.7 981,115 - BWI76_RS04695 0.71 -0.1 981,274 - BWI76_RS04695 0.80 -0.9 981,303 + BWI76_RS04695 0.82 -0.7 981,351 + BWI76_RS04695 0.84 +0.8 981,364 - BWI76_RS04695 0.85 -2.8 981,388 - BWI76_RS04695 0.86 -0.9 981,388 - BWI76_RS04695 0.86 +0.6 981,542 - +0.6 981,551 + -1.9 981,551 + -0.0 981,551 + -1.7 981,559 - -1.2 981,593 - -0.8 981,617 - -1.5 981,665 + -1.8 981,801 + BWI76_RS04700 0.36 -2.1 981,884 - BWI76_RS04700 0.53 -0.3 982,063 + BWI76_RS04700 0.89 +0.3 982,068 + +0.3 982,222 + +0.0 982,222 + -0.3 982,340 + -0.6
Or see this region's nucleotide sequence