Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01575 and BWI76_RS01580 are separated by 42 nucleotides BWI76_RS01580 and BWI76_RS01585 are separated by 186 nucleotides BWI76_RS01585 and BWI76_RS01590 are separated by 12 nucleotides BWI76_RS01590 and BWI76_RS01595 are separated by 12 nucleotides
BWI76_RS01575: BWI76_RS01575 - endonuclease V, at 320,653 to 321,324
_RS01575
BWI76_RS01580: BWI76_RS01580 - hypothetical protein, at 321,367 to 321,957
_RS01580
BWI76_RS01585: BWI76_RS01585 - transcriptional regulator, at 322,144 to 322,416
_RS01585
BWI76_RS01590: BWI76_RS01590 - hypothetical protein, at 322,429 to 323,121
_RS01590
BWI76_RS01595: BWI76_RS01595 - zinc resistance protein, at 323,134 to 323,556
_RS01595
Position (kb) 322
323 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.210 kb on + strand, within BWI76_RS01575 at 321.211 kb on - strand, within BWI76_RS01575 at 321.246 kb on + strand, within BWI76_RS01575 at 321.263 kb on + strand at 321.617 kb on + strand, within BWI76_RS01580 at 321.625 kb on - strand, within BWI76_RS01580 at 321.888 kb on + strand, within BWI76_RS01580 at 322.181 kb on + strand, within BWI76_RS01585 at 322.181 kb on + strand at 322.189 kb on - strand, within BWI76_RS01585 at 322.220 kb on + strand, within BWI76_RS01585 at 322.289 kb on + strand, within BWI76_RS01585 at 322.305 kb on - strand, within BWI76_RS01585 at 322.310 kb on - strand, within BWI76_RS01585 at 322.329 kb on + strand, within BWI76_RS01585 at 322.419 kb on + strand at 322.419 kb on - strand at 322.608 kb on - strand, within BWI76_RS01590 at 322.640 kb on - strand, within BWI76_RS01590 at 322.756 kb on - strand, within BWI76_RS01590 at 322.772 kb on + strand, within BWI76_RS01590 at 322.772 kb on + strand, within BWI76_RS01590 at 322.780 kb on - strand, within BWI76_RS01590 at 322.952 kb on + strand, within BWI76_RS01590 at 322.973 kb on - strand, within BWI76_RS01590 at 323.025 kb on - strand, within BWI76_RS01590 at 323.054 kb on + strand at 323.085 kb on + strand at 323.085 kb on - strand at 323.173 kb on + strand at 323.173 kb on + strand at 323.181 kb on - strand, within BWI76_RS01595
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 321,201 - BWI76_RS01575 0.82 -0.1 321,201 - BWI76_RS01575 0.82 -0.3 321,201 - BWI76_RS01575 0.82 -0.7 321,201 - BWI76_RS01575 0.82 -0.8 321,210 + BWI76_RS01575 0.83 -0.6 321,211 - BWI76_RS01575 0.83 +0.3 321,246 + BWI76_RS01575 0.88 -0.6 321,263 + +0.6 321,617 + BWI76_RS01580 0.42 -0.4 321,625 - BWI76_RS01580 0.44 +1.0 321,888 + BWI76_RS01580 0.88 +0.2 322,181 + BWI76_RS01585 0.14 +3.4 322,181 + +5.3 322,189 - BWI76_RS01585 0.16 +2.0 322,220 + BWI76_RS01585 0.28 +3.5 322,289 + BWI76_RS01585 0.53 +4.0 322,305 - BWI76_RS01585 0.59 +1.5 322,310 - BWI76_RS01585 0.61 +2.0 322,329 + BWI76_RS01585 0.68 +4.6 322,419 + +3.6 322,419 - +1.1 322,608 - BWI76_RS01590 0.26 +1.0 322,640 - BWI76_RS01590 0.30 +1.0 322,756 - BWI76_RS01590 0.47 +0.4 322,772 + BWI76_RS01590 0.49 -2.4 322,772 + BWI76_RS01590 0.49 +0.5 322,780 - BWI76_RS01590 0.51 +0.1 322,952 + BWI76_RS01590 0.75 -0.8 322,973 - BWI76_RS01590 0.78 -0.7 323,025 - BWI76_RS01590 0.86 -0.1 323,054 + -0.3 323,085 + +0.1 323,085 - +0.4 323,173 + -0.1 323,173 + -2.4 323,181 - BWI76_RS01595 0.11 +1.5
Or see this region's nucleotide sequence