Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27690

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
6,033,943	+				-2.5
6,033,943	+				-1.7
6,033,943	+				+0.3
6,033,943	+				+0.6
6,033,944	-				-2.4
6,033,944	-				-0.5
6,033,944	-				-2.0
6,033,944	-				-2.0
6,033,944	-				-1.0
6,033,944	-				-2.5
6,033,944	-				-1.4
6,033,956	+				-3.3
6,034,026	-		AO353_27680	0.15	-0.1
6,034,081	+		AO353_27680	0.30	-1.0
6,034,081	+		AO353_27680	0.30	-1.1
6,034,081	+		AO353_27680	0.30	+0.0
6,034,081	+		AO353_27680	0.30	-2.7
6,034,082	-		AO353_27680	0.30	-2.0
6,034,082	-		AO353_27680	0.30	-1.0
6,034,082	-		AO353_27680	0.30	-0.4
6,034,099	-		AO353_27680	0.35	-2.2
6,034,144	-		AO353_27680	0.47	-1.5
6,034,187	+		AO353_27680	0.59	-1.0
6,034,188	-		AO353_27680	0.59	-2.0
6,034,188	-		AO353_27680	0.59	-1.3
6,034,215	-		AO353_27680	0.67	+0.6
6,034,215	-		AO353_27680	0.67	-2.4
6,034,215	-		AO353_27680	0.67	+1.1
6,034,215	-		AO353_27680	0.67	-1.4
6,034,215	-		AO353_27680	0.67	+0.0
6,034,253	-		AO353_27680	0.77	-1.4
6,034,253	-		AO353_27680	0.77	-0.4
6,034,253	-		AO353_27680	0.77	+0.9
6,034,282	+		AO353_27680	0.85	-1.4
6,034,282	+		AO353_27680	0.85	-0.8
6,034,283	-		AO353_27680	0.85	-0.7
6,034,309	+				-1.7
6,034,309	+				-1.5
6,034,310	-				-0.2
6,034,326	+				-1.0
6,034,326	+				-1.0
6,034,327	-				-1.7
6,034,352	+				-1.0
6,034,353	-				-1.0
6,034,353	-				+1.8
6,034,366	-				-1.7
6,034,439	+				+0.6
6,034,439	+				+0.6
6,034,448	+				-1.2
6,034,448	+				-1.4
6,034,448	+				+0.3
6,034,511	-				-0.4
6,034,511	-				+0.6
6,034,521	+				+0.9
6,034,521	+				-0.1
6,034,521	+				+1.6
6,034,522	-				+1.6
6,034,522	-				+1.2
6,034,522	-				+1.0
6,034,522	-				+0.2
6,034,522	-				-0.5
6,034,552	+				-0.4
6,034,552	+				+1.0
6,034,660	+		AO353_27685	0.40	-1.0
6,034,661	-		AO353_27685	0.40	+0.9
6,034,673	+		AO353_27685	0.44	-0.6
6,034,674	-		AO353_27685	0.45	-0.7
6,034,674	-				+0.6
6,034,759	+		AO353_27685	0.76	-0.7
6,034,759	+		AO353_27685	0.76	+1.4
6,034,760	-		AO353_27685	0.77	+1.4
6,034,760	-		AO353_27685	0.77	+1.2
6,034,760	-		AO353_27685	0.77	-1.0
6,034,764	+		AO353_27685	0.78	+0.3
6,034,764	+		AO353_27685	0.78	-0.2
6,034,765	-		AO353_27685	0.79	-1.7
6,034,765	-		AO353_27685	0.79	-0.7
6,034,823	+				-2.8
6,034,836	-				-1.4
6,034,836	-				+3.4
6,034,844	-				-1.0
6,034,885	+				+0.0
6,034,886	-				+0.0
6,034,889	+				-0.1
6,034,889	+				+0.4
6,034,890	-				+0.6
6,034,904	+				-2.0
6,034,904	+				+0.6
6,034,904	+				+1.6
6,034,904	+				-2.0
6,034,904	+				-0.7
6,034,905	-				-0.2
6,034,905	-				+0.6
6,034,905	-				+0.3
6,034,905	-				+0.3
6,034,905	-				+0.8
6,034,982	+				-3.2
6,034,982	+				+0.6
6,034,982	+				-1.0
6,034,982	+				-1.9
6,034,982	+				-2.2
6,034,982	+				+1.0
6,034,982	+				-1.0
6,034,982	+				-2.8
6,034,982	+				-3.0
6,034,983	-				-2.5
6,034,983	-				-0.6
6,034,983	-				-0.6
6,034,983	-				-2.2
6,034,983	-				-3.3
6,034,983	-				+0.2
6,034,983	-				-0.4
6,034,983	-				-0.2
6,035,231	+		AO353_27690	0.26	+0.5
6,035,231	+		AO353_27690	0.26	-2.0
6,035,232	-		AO353_27690	0.26	-2.0
6,035,267	+		AO353_27690	0.29	+0.3
6,035,267	+		AO353_27690	0.29	-3.6
6,035,268	-		AO353_27690	0.29	-1.2
6,035,268	-		AO353_27690	0.29	+1.0
6,035,268	-		AO353_27690	0.29	-2.2
6,035,507	+		AO353_27690	0.48	-1.7
6,035,507	+		AO353_27690	0.48	-0.2
6,035,507	+		AO353_27690	0.48	-0.7
6,035,507	+		AO353_27690	0.48	-0.1
6,035,508	-		AO353_27690	0.48	-0.7
6,035,508	-		AO353_27690	0.48	-1.4
6,035,508	-		AO353_27690	0.48	-1.0
6,035,508	-		AO353_27690	0.48	-1.0
6,035,508	-		AO353_27690	0.48	-0.8
6,035,508	-		AO353_27690	0.48	+0.0
6,035,508	-		AO353_27690	0.48	-3.5
6,035,508	-		AO353_27690	0.48	-2.0
6,035,675	+		AO353_27690	0.61	-1.2
6,035,675	+		AO353_27690	0.61	-1.0
6,035,675	+		AO353_27690	0.61	-2.4
6,035,675	+		AO353_27690	0.61	+0.6
6,035,675	+		AO353_27690	0.61	-1.4
6,035,676	-		AO353_27690	0.61	-1.7
6,035,676	-		AO353_27690	0.61	-2.0
6,035,676	-		AO353_27690	0.61	+0.3
6,035,676	-		AO353_27690	0.61	-0.7
6,035,676	-		AO353_27690	0.61	-2.0
6,035,676	-		AO353_27690	0.61	-1.0
6,035,739	+		AO353_27690	0.67	+0.3
6,035,780	+		AO353_27690	0.70	-2.4
6,035,780	+		AO353_27690	0.70	-0.4
6,035,780	+		AO353_27690	0.70	-1.4
6,035,780	+		AO353_27690	0.70	-1.0
6,035,780	+		AO353_27690	0.70	-1.7
6,035,780	+		AO353_27690	0.70	-1.4
6,035,780	+		AO353_27690	0.70	-0.1
6,035,780	+		AO353_27690	0.70	-0.6
6,035,781	-		AO353_27690	0.70	+0.8
6,035,781	-		AO353_27690	0.70	-1.0
6,035,781	-		AO353_27690	0.70	-2.2
6,035,781	-		AO353_27690	0.70	-2.0
6,035,781	-		AO353_27690	0.70	-2.0
6,035,781	-		AO353_27690	0.70	+0.4
6,035,781	-		AO353_27690	0.70	+0.6
6,035,870	+		AO353_27690	0.77	-0.5
6,035,870	+		AO353_27690	0.77	-0.1
6,035,870	+		AO353_27690	0.77	+0.6
6,035,870	+		AO353_27690	0.77	-0.7
6,035,871	-		AO353_27690	0.77	-0.0
6,035,871	-		AO353_27690	0.77	-3.2
6,035,871	-		AO353_27690	0.77	-2.0
6,035,871	-		AO353_27690	0.77	-1.4
6,035,994	+		AO353_27690	0.87	-0.4
6,035,995	-		AO353_27690	0.87	-1.2
6,035,995	-		AO353_27690	0.87	-3.5
6,036,033	+		AO353_27690	0.90	-2.8
6,036,034	-				-2.4
6,036,152	+				+0.6
6,036,153	-				+0.2
6,036,153	-				+1.3
6,036,153	-				-2.0
6,036,153	-				+0.4
6,036,233	+				+0.0
6,036,233	+				+0.3
6,036,233	+				-0.2
6,036,233	+				-0.4
6,036,233	+				-1.1
6,036,234	-				+0.9
6,036,234	-				+2.0
6,036,234	-				+0.4
6,036,275	+				-1.7
6,036,275	+				+0.6
6,036,275	+				+0.5
6,036,276	-				-0.7
6,036,276	-				+0.5
6,036,276	-				+0.8
6,036,355	+				+0.3
6,036,356	-				-0.8
6,036,370	+				-0.0
6,036,381	+				-2.0
6,036,381	+				-0.8
6,036,381	+				+0.6
6,036,381	+				+1.6
6,036,381	+				+0.4
6,036,382	-				-0.5
6,036,382	-				-2.4
6,036,406	+				+1.6
6,036,406	+				-0.8
6,036,406	+				+0.8
6,036,406	+				+0.6
6,036,407	-				+0.0
6,036,410	+				+0.1
6,036,410	+				-1.1
6,036,410	+				+0.8
6,036,410	+				+0.6
6,036,410	+				-1.2
6,036,410	+				-0.7
6,036,410	+				+0.3
6,036,410	+				+0.6
6,036,410	+				+0.1
6,036,410	+				+1.4
6,036,410	+				-1.0
6,036,410	+				+0.3
6,036,410	+				-0.8
6,036,410	+				-0.2
6,036,410	+				-0.4
6,036,411	-				-0.7
6,036,411	-				+1.1
6,036,411	-				-1.4
6,036,411	-				+2.0
6,036,411	-				-0.5
6,036,411	-				+0.8
6,036,411	-				+0.3
6,036,411	-				-0.5
6,036,411	-				+1.2
6,036,411	-				-0.5
6,036,411	-				+2.2
6,036,411	-				+0.6
6,036,414	+				-0.4
6,036,414	+				+1.2
6,036,414	+				+0.4
6,036,414	+				+0.8
6,036,414	+				-1.1
6,036,414	+				-0.7
6,036,414	+				+1.4
6,036,414	+				+0.4
6,036,414	+				+0.4
6,036,414	+				+1.4
6,036,414	+				-1.4
6,036,414	+				-0.2
6,036,414	+				-1.1
6,036,414	+				+0.8
6,036,414	+				+0.0
6,036,414	+				+0.4
6,036,415	-				+0.4
6,036,415	-				-0.1
6,036,415	-				+1.0
6,036,415	-				+0.6
6,036,415	-				+1.1
6,036,415	-				-1.0
6,036,415	-				-0.8
6,036,415	-				-0.4
6,036,415	-				-2.8
6,036,415	-				-1.2
6,036,415	-				+0.6
6,036,415	-				-1.0
6,036,415	-				-1.7
6,036,415	-				+1.6
6,036,415	-				+0.2
6,036,415	-				-0.4
6,036,415	-				-1.2
6,036,415	-				-1.1
6,036,415	-				+0.6
6,036,415	-				+0.1
6,036,415	-				-2.0
6,036,415	-				+0.8
6,036,415	-				-0.1
6,036,415	-				+0.8
6,036,416	+				+1.2
6,036,416	+				-0.6
6,036,416	+				-1.0
6,036,416	+				-2.5
6,036,416	+				-1.1
6,036,417	-				+0.1
6,036,444	+				+0.3
6,036,445	-				-1.1
6,036,458	+				+0.3
6,036,461	+				-0.8
6,036,462	-				+0.6
6,036,643	-				-0.4
6,036,677	-				+0.6
6,036,677	-				-1.7
6,036,677	-				+1.2
6,036,712	+				+1.4
6,036,712	+				-1.0
6,036,712	+				-1.5
6,036,713	-				+2.0
6,036,713	-				+0.2
6,036,731	+				-2.0
6,036,777	+				+2.6
6,036,778	-				-1.7
6,036,828	+				+0.6
6,036,828	+				+0.6
6,036,829	-				+0.6
6,036,829	-				+0.6
6,036,829	-				-1.7
6,036,829	-				-2.0
6,036,829	-				-1.7
6,036,829	-				-1.0
6,036,964	+		AO353_27695	0.14	+0.0
6,036,965	-		AO353_27695	0.14	-1.0
6,036,965	-		AO353_27695	0.14	-2.0
6,037,053	-		AO353_27695	0.18	+1.0
6,037,111	+		AO353_27695	0.21	+0.6