Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25715

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
5,669,092	+				+1.0
5,669,092	+				+0.9
5,669,093	-				-0.2
5,669,093	-				+0.9
5,669,093	-				-1.0
5,669,180	+				-1.1
5,669,270	+				-0.1
5,669,270	+				+1.2
5,669,270	+				+1.4
5,669,270	+				-1.1
5,669,271	-				-1.6
5,669,271	-				-1.6
5,669,271	-				-2.1
5,669,271	-				-0.2
5,669,699	-				-1.6
5,669,699	-		AO353_25710	0.59	+0.8
5,669,702	+		AO353_25710	0.59	-0.8
5,669,702	+		AO353_25710	0.59	-0.1
5,669,702	+		AO353_25710	0.59	+0.4
5,669,703	-		AO353_25710	0.59	+0.4
5,669,703	-		AO353_25710	0.59	+0.4
5,669,948	+		AO353_25710	0.88	-0.3
5,669,948	+		AO353_25710	0.88	-0.1
5,669,949	-		AO353_25710	0.88	-1.9
5,669,958	-		AO353_25710	0.89	+0.3
5,669,958	-		AO353_25710	0.89	-1.1
5,669,958	-		AO353_25710	0.89	-1.1
5,669,958	-		AO353_25710	0.89	-1.9
5,670,157	+				+0.9
5,670,157	+				+0.7
5,670,158	-				+2.4
5,670,158	-				+1.0
5,670,160	+				-0.6
5,670,160	+				+0.2
5,670,161	-				-0.9
5,670,161	-				-0.6
5,670,161	-				+1.1
5,670,161	-				-1.1
5,670,222	+		AO353_25715	0.14	+0.6
5,670,223	-				+0.4
5,670,417	+		AO353_25715	0.30	-0.3
5,670,417	+		AO353_25715	0.30	-0.6
5,670,418	-		AO353_25715	0.30	+3.0
5,670,435	+		AO353_25715	0.31	+0.4
5,670,435	+		AO353_25715	0.31	+0.9
5,670,637	+		AO353_25715	0.48	+2.2
5,670,637	+		AO353_25715	0.48	+0.4
5,670,637	+		AO353_25715	0.48	+1.4
5,670,637	+		AO353_25715	0.48	+0.3
5,670,637	+		AO353_25715	0.48	-1.9
5,670,637	+		AO353_25715	0.48	-1.1
5,670,637	+		AO353_25715	0.48	-0.1
5,670,637	+				+1.0
5,670,637	+		AO353_25715	0.48	-0.9
5,670,637	+		AO353_25715	0.48	+0.4
5,670,637	+		AO353_25715	0.48	+1.1
5,670,638	-		AO353_25715	0.48	+1.6
5,670,638	-		AO353_25715	0.48	-0.8
5,670,638	-		AO353_25715	0.48	+2.4
5,670,638	-		AO353_25715	0.48	+0.6
5,670,638	-		AO353_25715	0.48	+0.8
5,670,658	+		AO353_25715	0.50	-1.4
5,670,658	+		AO353_25715	0.50	-2.9
5,670,659	-		AO353_25715	0.50	+1.2
5,670,708	+		AO353_25715	0.54	+1.2
5,670,709	-		AO353_25715	0.54	-0.3
5,670,727	+		AO353_25715	0.56	-0.0
5,670,728	-		AO353_25715	0.56	+2.1
5,670,728	-		AO353_25715	0.56	-0.5
5,670,728	-		AO353_25715	0.56	+0.7
5,670,781	+		AO353_25715	0.60	-0.0
5,670,940	-		AO353_25715	0.73	-1.4
5,670,941	+		AO353_25715	0.74	+1.5
5,670,942	-		AO353_25715	0.74	-0.3
5,670,942	-		AO353_25715	0.74	-0.3
5,670,942	-		AO353_25715	0.74	+0.4
5,670,942	-		AO353_25715	0.74	-0.3
5,670,942	-		AO353_25715	0.74	-0.1
5,670,971	-		AO353_25715	0.76	+0.1
5,671,142	-				-0.1
5,671,150	+				+1.4
5,671,150	+				+1.0
5,671,253	+				-1.7
5,671,254	-				-0.3
5,671,254	-				+1.4
5,671,269	+				-0.9
5,671,269	+				-2.1
5,671,286	+				-0.1
5,671,317	-				-1.4
5,671,317	-				-1.1
5,671,514	+		AO353_25720	0.18	+0.4
5,671,514	+		AO353_25720	0.18	+0.7
5,671,514	+		AO353_25720	0.18	+1.3
5,671,515	-		AO353_25720	0.18	-0.6
5,671,515	-		AO353_25720	0.18	+0.4
5,671,515	-		AO353_25720	0.18	-0.4
5,671,842	+		AO353_25720	0.44	+1.0
5,672,086	+		AO353_25720	0.62	-0.3
5,672,087	-		AO353_25720	0.62	+1.7
5,672,087	-		AO353_25720	0.62	+0.4
5,672,087	-		AO353_25720	0.62	+1.2
5,672,224	+		AO353_25720	0.73	-1.1