Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22995

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
5,047,485	-		AO353_22985	0.24	-0.2
5,047,596	+		AO353_22985	0.81	-0.3
5,047,596	+		AO353_22985	0.81	+0.4
5,047,597	-		AO353_22985	0.82	-0.8
5,047,597	-		AO353_22985	0.82	+0.4
5,047,597	-		AO353_22985	0.82	+0.6
5,047,597	-		AO353_22985	0.82	-0.0
5,047,626	+				+0.2
5,047,626	+				-0.4
5,047,626	+				-2.2
5,047,627	-				-0.6
5,047,627	-				+0.2
5,047,685	+				+0.2
5,047,685	+				-0.7
5,047,703	+				+3.6
5,047,703	+				-0.3
5,047,703	+				-1.4
5,047,703	+				+0.4
5,047,704	-				-2.6
5,047,704	-				-0.4
5,047,704	-				-1.7
5,047,704	-				+1.0
5,047,704	-				-2.9
5,047,709	+				+0.6
5,047,709	+				-0.6
5,047,710	-				+0.1
5,047,710	-				+0.9
5,047,841	+				-1.6
5,047,841	+				+2.6
5,047,841	+				+0.9
5,047,842	-				-1.6
5,047,842	-				-0.1
5,047,842	-				-0.4
5,047,842	-				+2.9
5,047,842	-				-0.6
5,047,842	-				+0.3
5,047,842	-				+1.3
5,047,842	-				+0.3
5,047,842	-				-0.0
5,047,842	-				+1.2
5,047,898	-				-0.2
5,047,898	-				-0.0
5,047,946	+				-0.6
5,047,946	+				+0.6
5,047,946	+				+1.3
5,047,946	+				-0.3
5,047,946	+				+1.0
5,047,947	-				-1.4
5,047,947	-				-0.4
5,047,947	-				-1.0
5,047,950	+				-2.2
5,047,950	+				-0.1
5,047,951	-				+0.1
5,047,951	-				-1.0
5,047,951	-				-0.5
5,047,951	-				-0.4
5,047,951	-				+1.0
5,047,982	+				-0.0
5,047,983	-				+0.9
5,047,983	-				-0.7
5,047,983	-				-1.6
5,048,007	+				-0.2
5,048,007	+				+1.3
5,048,008	-				-0.1
5,048,015	+				-0.2
5,048,015	+				-3.0
5,048,048	+		AO353_22990	0.18	-2.2
5,048,048	+		AO353_22990	0.18	+0.8
5,048,048	+		AO353_22990	0.18	+1.4
5,048,048	+		AO353_22990	0.18	-0.8
5,048,048	+		AO353_22990	0.18	+2.5
5,048,048	+		AO353_22990	0.18	+0.6
5,048,051	+		AO353_22990	0.19	+0.1
5,048,127	-		AO353_22990	0.41	-1.4
5,048,127	-		AO353_22990	0.41	+1.2
5,048,127	-		AO353_22990	0.41	+0.4
5,048,179	+		AO353_22990	0.55	-0.4
5,048,180	-		AO353_22990	0.56	+0.9
5,048,334	+				-1.0
5,048,334	+				-1.0
5,048,334	+				-2.0
5,048,334	+				+4.3
5,048,334	+				+0.2
5,048,334	+				-0.6
5,048,334	+				+0.2
5,048,334	+				-0.5
5,048,335	-				+0.6
5,048,335	-				+1.3
5,048,335	-				+0.6
5,048,335	-				+1.3
5,048,335	-				-1.0
5,048,335	-				+0.6
5,048,335	-				+0.7
5,048,335	-				+1.3
5,048,335	-				+0.5
5,048,335	-				+1.2
5,048,335	-				-1.4
5,048,335	-				-0.3
5,048,335	-				-2.4
5,048,335	-				+0.3
5,048,420	+				-1.7
5,048,420	+				+0.2
5,048,421	-				+0.6
5,048,421	-				+1.6
5,048,421	-				-2.2
5,048,421	-				-0.3
5,048,448	-				+0.1
5,048,468	+				+0.6
5,048,469	-				-1.4
5,048,469	-				-0.7
5,048,509	-				+0.7
5,048,525	+				+0.3
5,048,526	-				+1.7
5,048,529	+				-1.0
5,048,529	+				-1.7
5,048,530	-				-1.0
5,048,649	+		AO353_22995	0.21	-2.5
5,048,649	+		AO353_22995	0.21	+0.6
5,048,649	+		AO353_22995	0.21	+0.6
5,048,650	-		AO353_22995	0.21	-0.6
5,048,650	-		AO353_22995	0.21	-0.1
5,048,660	+		AO353_22995	0.22	-1.7
5,048,660	+		AO353_22995	0.22	+0.6
5,048,661	-		AO353_22995	0.22	-1.5
5,048,661	-		AO353_22995	0.22	-0.7
5,048,928	+		AO353_22995	0.53	+1.2
5,048,928	+		AO353_22995	0.53	-3.1
5,048,929	-		AO353_22995	0.53	-1.4
5,048,968	-		AO353_22995	0.57	-1.0
5,049,059	+		AO353_22995	0.68	-0.3
5,049,059	+		AO353_22995	0.68	-0.7
5,049,059	+		AO353_22995	0.68	-0.7
5,049,060	-		AO353_22995	0.68	+1.3
5,049,060	-		AO353_22995	0.68	+2.0
5,049,082	+		AO353_22995	0.70	+0.5
5,049,082	+		AO353_22995	0.70	-1.0
5,049,082	+		AO353_22995	0.70	-1.4
5,049,082	+		AO353_22995	0.70	-0.1
5,049,083	-		AO353_22995	0.71	-1.1
5,049,106	+		AO353_22995	0.73	-0.4
5,049,106	+		AO353_22995	0.73	-0.9
5,049,122	+		AO353_22995	0.75	-1.4
5,049,122	+		AO353_22995	0.75	-0.3
5,049,123	-		AO353_22995	0.75	-1.0
5,049,123	-		AO353_22995	0.75	+2.9
5,049,241	+		AO353_22995	0.89	-1.0
5,049,241	+		AO353_22995	0.89	-2.6
5,049,241	+		AO353_22995	0.89	-0.8
5,049,241	+		AO353_22995	0.89	+1.3
5,049,241	+		AO353_22995	0.89	-0.4
5,049,242	-		AO353_22995	0.89	-1.4
5,049,242	-		AO353_22995	0.89	+0.6
5,049,242	-		AO353_22995	0.89	+0.6
5,049,325	-				-1.7
5,049,343	-				+0.3
5,049,343	-				+0.1
5,049,343	-				-0.4
5,049,351	+				-2.0
5,049,358	+				+0.6
5,049,358	+				-0.6
5,049,478	+				+0.1
5,049,478	+				-1.2
5,049,478	+				+0.4
5,049,557	+				+0.2
5,049,557	+				+2.4
5,049,577	+				-0.2
5,049,577	+				+0.3
5,049,577	+				-0.1
5,049,577	+				+1.6
5,049,577	+				-1.4
5,049,577	+				-0.7
5,049,577	+				-3.0
5,049,577	+				-2.8
5,049,577	+				+0.1
5,049,578	-				+1.2
5,049,578	-				+0.6
5,049,578	-				-0.3
5,049,578	-				-0.7
5,049,621	+				-2.5
5,049,621	+				-1.0
5,049,621	+				-0.0
5,049,621	+				-1.8
5,049,621	+				-1.0
5,049,621	+				-0.2
5,049,621	+				-0.8
5,049,621	+				-0.3
5,049,621	+				-3.1
5,049,622	-				-0.8
5,049,622	-				-1.7
5,049,622	-				-1.0
5,049,622	-				-1.8
5,049,622	-				+0.6
5,049,635	+				+0.0
5,049,636	-				-3.3
5,049,696	-				+0.9
5,049,716	+				-1.2
5,049,717	-				-0.9
5,049,717	-				-1.3
5,049,767	+		AO353_23000	0.11	-1.8
5,049,767	+				-0.4
5,049,767	+		AO353_23000	0.11	-0.2
5,049,768	-		AO353_23000	0.11	+1.2
5,049,881	+		AO353_23000	0.26	+0.4
5,049,882	-		AO353_23000	0.26	+0.4
5,049,882	-				-1.4
5,049,882	-		AO353_23000	0.26	-0.8
5,049,891	+		AO353_23000	0.27	+0.9
5,049,906	+		AO353_23000	0.29	-2.0
5,049,958	+		AO353_23000	0.36	-1.4
5,049,958	+		AO353_23000	0.36	-0.3
5,049,958	+		AO353_23000	0.36	+1.0
5,049,958	+		AO353_23000	0.36	-0.4
5,049,959	-		AO353_23000	0.36	-0.3
5,049,959	-		AO353_23000	0.36	-0.4
5,049,987	+		AO353_23000	0.39	+0.6
5,049,988	-		AO353_23000	0.40	-0.0
5,050,003	+		AO353_23000	0.42	-1.4
5,050,004	-		AO353_23000	0.42	+0.6
5,050,101	+		AO353_23000	0.54	-2.6
5,050,101	+		AO353_23000	0.54	-2.8
5,050,101	+		AO353_23000	0.54	+0.0
5,050,101	+		AO353_23000	0.54	-0.2
5,050,102	-		AO353_23000	0.54	-2.0
5,050,250	+		AO353_23000	0.74	-0.9
5,050,250	+		AO353_23000	0.74	-1.4
5,050,250	+		AO353_23000	0.74	-1.0
5,050,251	-		AO353_23000	0.74	-1.8
5,050,251	-		AO353_23000	0.74	-0.7
5,050,251	-		AO353_23000	0.74	+0.6
5,050,251	-		AO353_23000	0.74	+0.6
5,050,251	-		AO353_23000	0.74	-0.6
5,050,251	-		AO353_23000	0.74	+0.1
5,050,251	-		AO353_23000	0.74	-1.8
5,050,275	+		AO353_23000	0.77	-0.2
5,050,276	-		AO353_23000	0.77	+1.2
5,050,276	-		AO353_23000	0.77	+0.2
5,050,276	-		AO353_23000	0.77	+1.2
5,050,276	-		AO353_23000	0.77	+0.4
5,050,276	-				+2.2
5,050,336	-		AO353_23000	0.85	+0.2
5,050,336	-		AO353_23000	0.85	-0.4