Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22950

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
5,040,444	+		AO353_22945	0.67	-1.7
5,040,444	+		AO353_22945	0.67	-1.0
5,040,483	+		AO353_22945	0.68	-0.5
5,040,483	+		AO353_22945	0.68	-1.4
5,040,483	+		AO353_22945	0.68	-1.4
5,040,483	+		AO353_22945	0.68	-2.6
5,040,483	+		AO353_22945	0.68	-0.4
5,040,483	+		AO353_22945	0.68	-3.1
5,040,483	+		AO353_22945	0.68	-3.1
5,040,483	+		AO353_22945	0.68	-0.7
5,040,484	-		AO353_22945	0.69	-0.9
5,040,484	-		AO353_22945	0.69	-2.0
5,040,484	-		AO353_22945	0.69	+1.9
5,040,484	-		AO353_22945	0.69	-1.0
5,040,484	-		AO353_22945	0.69	-2.0
5,040,546	+		AO353_22945	0.71	-0.2
5,040,546	+		AO353_22945	0.71	-1.0
5,040,546	+		AO353_22945	0.71	-1.4
5,040,546	+		AO353_22945	0.71	-0.2
5,040,546	+		AO353_22945	0.71	-1.7
5,040,546	+		AO353_22945	0.71	-0.4
5,040,547	-		AO353_22945	0.71	+0.6
5,040,666	+		AO353_22945	0.77	-2.2
5,040,666	+		AO353_22945	0.77	-2.3
5,040,667	-		AO353_22945	0.77	-0.4
5,040,667	-		AO353_22945	0.77	-0.3
5,040,768	+		AO353_22945	0.81	+0.8
5,040,769	-		AO353_22945	0.81	-1.7
5,040,769	-		AO353_22945	0.81	-3.3
5,040,918	+		AO353_22945	0.88	-1.0
5,040,919	-		AO353_22945	0.88	-1.4
5,041,059	+				+3.6
5,041,060	-				-1.0
5,041,060	-				-0.0
5,041,074	+				-2.2
5,041,273	+				-0.0
5,041,273	+				-0.0
5,041,273	+				+0.7
5,041,274	-				-0.2
5,041,274	-				-1.6
5,041,445	+		AO353_22950	0.20	-0.4
5,041,446	-		AO353_22950	0.20	+0.2
5,041,446	-		AO353_22950	0.20	+0.1
5,041,446	-		AO353_22950	0.20	-0.1
5,041,456	+		AO353_22950	0.21	-0.6
5,041,457	-		AO353_22950	0.21	-1.0
5,041,457	-		AO353_22950	0.21	-0.2
5,041,563	-		AO353_22950	0.34	-2.0
5,042,016	-		AO353_22950	0.86	+0.9
5,042,181	+				-0.4
5,042,181	+				+0.2
5,042,181	+				-3.2
5,042,181	+				-0.6
5,042,181	+				+1.9
5,042,181	+				-0.6
5,042,182	-				+0.8
5,042,182	-				+0.8
5,042,183	+				+1.3
5,042,183	+				-0.7
5,042,184	-				+0.4
5,042,184	-				+0.8
5,042,184	-				-0.7
5,042,184	-				+1.3
5,042,184	-				-0.8
5,042,184	-				-1.7
5,042,184	-				+0.2
5,042,184	-				-1.0
5,042,216	+				+1.6
5,042,216	+				-1.4
5,042,217	-				-0.4
5,042,254	+				-0.4
5,042,254	+				+0.1
5,042,254	+				+1.2
5,042,254	+				+0.2
5,042,255	-				+0.3
5,042,255	-				-0.8
5,042,255	-				+0.6
5,042,255	-				+0.5
5,042,255	-				-0.0
5,042,255	-				+0.6
5,042,255	-				+1.0
5,042,255	-				+1.1
5,042,255	-				+0.1
5,042,255	-				+0.6
5,042,255	-				-0.6
5,042,255	-				-2.0
5,042,255	-				-1.8
5,042,255	-				+0.6
5,042,255	-				+1.0
5,042,255	-				-0.1
5,042,255	-				+1.6
5,042,255	-				-1.8
5,042,255	-				-1.8
5,042,256	+				-1.0
5,042,281	+				-1.0
5,042,281	+				-0.4
5,042,282	-				+0.0
5,042,282	-				+0.2
5,042,282	-				+0.2
5,042,302	+				-1.7
5,042,516	+		AO353_22955	0.25	+0.8
5,042,516	+		AO353_22955	0.25	-2.2
5,042,517	-				+1.6
5,042,517	-		AO353_22955	0.25	-0.3
5,042,517	-		AO353_22955	0.25	+0.9
5,042,793	-		AO353_22955	0.70	+2.6
5,042,793	-		AO353_22955	0.70	+0.2
5,042,849	+		AO353_22955	0.79	+0.3
5,042,849	+		AO353_22955	0.79	+0.9
5,043,007	+				-0.4
5,043,007	+				-1.0
5,043,007	+				+0.6
5,043,008	-				-2.5
5,043,091	+				+0.4
5,043,091	+				+0.5
5,043,091	+				-2.2
5,043,092	-				-0.4
5,043,092	-				+0.3
5,043,093	+				+0.5
5,043,093	+				+0.9
5,043,094	-				-1.2
5,043,094	-				-0.9
5,043,094	-				+1.2
5,043,132	+				+0.2
5,043,132	+				+3.6
5,043,132	+				-0.0
5,043,132	+				-0.7
5,043,132	+				+0.6
5,043,133	-				+0.9
5,043,133	-				-1.2
5,043,133	-				+1.3
5,043,133	-				+0.3
5,043,133	-				-2.0