Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22645

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,959,657	+		AO353_22640	0.47	-0.0
4,959,657	+		AO353_22640	0.47	+0.5
4,959,657	+		AO353_22640	0.47	-1.7
4,959,658	-		AO353_22640	0.47	+0.2
4,959,658	-		AO353_22640	0.47	-0.6
4,959,658	-		AO353_22640	0.47	+2.2
4,959,803	+		AO353_22640	0.59	-1.7
4,959,803	+		AO353_22640	0.59	-2.4
4,959,803	+		AO353_22640	0.59	+1.2
4,959,804	-		AO353_22640	0.59	-1.8
4,959,804	-		AO353_22640	0.59	+0.3
4,959,809	+		AO353_22640	0.59	+1.2
4,959,809	+		AO353_22640	0.59	-3.1
4,959,809	+		AO353_22640	0.59	+0.0
4,959,809	+		AO353_22640	0.59	-1.3
4,959,809	+		AO353_22640	0.59	+0.6
4,959,809	+		AO353_22640	0.59	-0.4
4,959,809	+		AO353_22640	0.59	+0.4
4,959,809	+		AO353_22640	0.59	+0.2
4,959,809	+		AO353_22640	0.59	-0.1
4,959,809	+		AO353_22640	0.59	-0.1
4,959,809	+		AO353_22640	0.59	+0.2
4,959,809	+		AO353_22640	0.59	-1.5
4,959,809	+		AO353_22640	0.59	-0.2
4,959,810	-		AO353_22640	0.59	+0.4
4,959,810	-		AO353_22640	0.59	+0.3
4,959,810	-		AO353_22640	0.59	+0.0
4,959,810	-		AO353_22640	0.59	-0.8
4,959,810	-		AO353_22640	0.59	+0.6
4,959,810	-		AO353_22640	0.59	-0.8
4,959,810	-		AO353_22640	0.59	+0.4
4,959,810	-		AO353_22640	0.59	-1.4
4,959,810	-		AO353_22640	0.59	+0.2
4,960,068	+		AO353_22640	0.80	-1.4
4,960,069	-		AO353_22640	0.80	+0.2
4,960,069	-		AO353_22640	0.80	-2.2
4,960,069	-		AO353_22640	0.80	+1.3
4,960,088	-		AO353_22640	0.82	-0.4
4,960,340	+				+0.4
4,960,340	+				+0.6
4,960,340	+				-1.7
4,960,340	+				+1.2
4,960,340	+				+0.6
4,960,340	+				-0.2
4,960,341	-				+0.6
4,960,341	-				-0.7
4,960,341	-				-1.0
4,960,341	-				-0.4
4,960,341	-				+0.6
4,960,341	-				-1.7
4,960,341	-				-2.0
4,960,341	-				-0.8
4,960,344	+				+1.2
4,960,344	+				-1.1
4,960,345	-				-2.0
4,960,345	-				-0.4
4,960,401	-				+0.6
4,960,401	-				+1.4
4,960,401	-				+1.5
4,960,401	-				+0.0
4,960,401	-				-0.6
4,960,401	-				+0.0
4,960,449	+				+0.8
4,960,450	-				-1.1
4,960,455	+				-0.1
4,960,455	+				-0.1
4,960,455	+				+0.7
4,960,456	-				-0.4
4,960,470	+				-1.4
4,960,513	+				-0.6
4,960,513	+				-0.1
4,960,514	-				-1.7
4,960,514	-				+0.1
4,960,632	+		AO353_22645	0.37	-1.7
4,960,632	+		AO353_22645	0.37	+0.9
4,960,632	+		AO353_22645	0.37	-1.0
4,960,633	-		AO353_22645	0.38	-1.6
4,960,702	-		AO353_22645	0.70	+0.1
4,960,725	-		AO353_22645	0.81	-2.4
4,960,786	+				+0.6
4,960,786	+				-2.2
4,960,786	+				+0.4
4,960,787	-				-1.4
4,960,811	+				+0.0
4,960,869	+				-2.2
4,960,869	+				-2.6
4,960,869	+				+0.2
4,960,869	+				-0.4
4,960,869	+				-1.0
4,960,870	-				-1.7
4,960,891	+				-1.7
4,960,891	+				-0.4
4,960,892	-				+1.8
4,960,892	-				+0.6
4,960,969	-				-1.4
4,960,974	-				+0.2
4,961,093	-				-0.7
4,961,134	+				-2.0
4,961,135	-				-2.9
4,961,135	-				-1.4
4,961,148	+				+0.2
4,961,208	+				-0.7
4,961,208	+				+0.3
4,961,209	-				-1.0
4,961,209	-				+0.9
4,961,209	-				+1.0
4,961,209	-				-0.4
4,961,217	-				-2.2
4,961,217	-				-2.0
4,961,217	-				+0.3
4,961,219	+				-1.0
4,961,219	+				-0.4
4,961,242	+				+0.6
4,961,243	-				-0.5
4,961,243	-				-0.1
4,961,272	-		AO353_22655	0.12	+1.0
4,961,279	-		AO353_22655	0.13	-1.0
4,961,288	+		AO353_22655	0.14	+1.6
4,961,568	+		AO353_22655	0.56	-0.7
4,961,568	+		AO353_22655	0.56	+0.4
4,961,568	+		AO353_22655	0.56	+0.6
4,961,569	-		AO353_22655	0.56	+2.8
4,961,569	-		AO353_22655	0.56	-0.2