Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22115

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,844,358	-		AO353_22105	0.61	-1.6
4,844,640	+				-1.3
4,844,640	+				-0.3
4,844,641	-				-1.6
4,844,651	+				-1.6
4,844,651	+				-1.6
4,844,651	+				-1.9
4,844,652	-				-1.6
4,844,652	-				-1.9
4,844,679	+				-0.3
4,844,679	+				-0.3
4,844,679	+				-3.3
4,844,680	-				-0.9
4,844,680	-				+0.3
4,844,680	-				+0.4
4,844,680	-				-1.6
4,844,680	-				+1.3
4,844,680	-				-1.3
4,844,685	+				-1.1
4,844,685	+				-1.6
4,844,685	+				-3.1
4,844,685	+				-1.3
4,844,685	+				-1.3
4,844,685	+				-2.6
4,844,686	-				-1.8
4,844,686	-				-3.1
4,844,686	-				-0.5
4,844,686	-				-1.3
4,844,686	-				-1.1
4,844,699	+				-2.8
4,844,700	-				-1.9
4,844,743	-		AO353_22110	0.14	-1.1
4,844,743	-		AO353_22110	0.14	-1.1
4,844,743	-		AO353_22110	0.14	-1.9
4,844,743	-		AO353_22110	0.14	-0.3
4,844,875	-		AO353_22110	0.34	-2.1
4,844,960	-		AO353_22110	0.46	-1.9
4,844,960	-		AO353_22110	0.46	-0.4
4,845,198	+		AO353_22110	0.81	+0.1
4,845,198	+		AO353_22110	0.81	-2.6
4,845,198	+		AO353_22110	0.81	-1.9
4,845,199	-		AO353_22110	0.81	-1.6
4,845,199	-		AO353_22110	0.81	-1.6
4,845,199	-		AO353_22110	0.81	-0.9
4,845,199	-		AO353_22110	0.81	-2.3
4,845,199	-		AO353_22110	0.81	-1.9
4,845,259	+				-1.3
4,845,259	+				-0.7
4,845,259	+				+0.7
4,845,259	+				-1.6
4,845,260	-				-0.3
4,845,260	-				-1.9
4,845,285	+				-1.3
4,845,285	+				-1.3
4,845,285	+				+2.5
4,845,285	+				-3.0
4,845,286	-				-0.3
4,845,583	+		AO353_22115	0.26	+0.2
4,845,584	-		AO353_22115	0.26	+1.3
4,845,584	-		AO353_22115	0.26	+1.5
4,845,787	+				-0.1
4,845,790	+		AO353_22115	0.47	+1.4
4,845,964	+		AO353_22115	0.65	+1.1
4,846,028	+		AO353_22115	0.72	+1.7
4,846,029	-		AO353_22115	0.72	-2.1
4,846,029	-		AO353_22115	0.72	+0.5
4,846,078	-		AO353_22115	0.77	-0.3
4,846,078	-		AO353_22115	0.77	+0.4
4,846,220	-				+0.7
4,846,220	-				+3.3
4,846,365	-				-0.9
4,846,365	-				+3.7
4,846,409	+				+1.3
4,846,409	+				+1.3
4,846,409	+				+1.7
4,846,410	-				+0.8
4,846,854	-		AO353_22120	0.54	+1.5
4,846,854	-		AO353_22120	0.54	-1.3
4,847,021	+		AO353_22120	0.70	-1.0
4,847,021	+		AO353_22120	0.70	-0.9
4,847,022	-		AO353_22120	0.70	-0.9
4,847,022	-		AO353_22120	0.70	-0.1
4,847,022	-		AO353_22120	0.70	+0.7
4,847,022	-		AO353_22120	0.70	+1.1
4,847,166	+		AO353_22120	0.85	+0.9
4,847,166	+		AO353_22120	0.85	-0.6
4,847,167	-		AO353_22120	0.85	-0.3
4,847,175	+		AO353_22120	0.86	+0.7
4,847,176	-		AO353_22120	0.86	-2.3