Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22070

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,831,420	+				-0.6
4,831,421	-				+0.3
4,831,421	-				+1.7
4,831,421	-				+1.3
4,831,478	-				+0.1
4,831,478	-				-1.6
4,831,478	-				-0.1
4,831,705	-				+0.5
4,831,750	-				-0.3
4,831,775	+				+0.2
4,831,775	+				+1.2
4,831,775	+				+0.0
4,831,775	+				-0.3
4,831,775	+				+0.7
4,831,776	-				+0.2
4,831,779	+				+1.4
4,831,779	+				+0.8
4,831,779	+				-2.5
4,831,779	+				+0.0
4,831,779	+				+1.1
4,831,779	+				+0.2
4,831,779	+				+1.0
4,831,780	-				+0.6
4,831,780	-				-0.6
4,831,780	-				+0.4
4,831,780	-				+0.4
4,831,780	-				+2.3
4,831,780	-				-0.6
4,831,780	-				-0.4
4,831,780	-				+0.7
4,831,832	-				-0.3
4,831,832	-				-0.3
4,831,886	-		AO353_22065	0.11	-1.3
4,831,975	-		AO353_22065	0.33	-0.4
4,832,217	+				+0.7
4,832,218	-				+0.8
4,832,294	+				+0.4
4,832,471	+		AO353_22070	0.22	-0.5
4,832,471	+		AO353_22070	0.22	+0.3
4,832,472	-		AO353_22070	0.22	-1.9
4,832,564	+		AO353_22070	0.36	-2.1
4,832,564	+		AO353_22070	0.36	-0.9
4,832,564	+		AO353_22070	0.36	+0.7
4,832,564	+		AO353_22070	0.36	-0.7
4,832,564	+		AO353_22070	0.36	-1.9
4,832,564	+		AO353_22070	0.36	+1.1
4,832,564	+		AO353_22070	0.36	+0.9
4,832,564	+		AO353_22070	0.36	+1.6
4,832,564	+		AO353_22070	0.36	+1.0
4,832,564	+		AO353_22070	0.36	-0.3
4,832,565	-		AO353_22070	0.36	-0.5
4,832,565	-		AO353_22070	0.36	+1.1
4,832,565	-		AO353_22070	0.36	-0.5
4,832,565	-		AO353_22070	0.36	-1.6
4,832,565	-		AO353_22070	0.36	+1.7
4,832,565	-		AO353_22070	0.36	+0.7
4,832,713	-		AO353_22070	0.58	-0.7
4,832,808	+		AO353_22070	0.72	-0.3
4,832,973	-				-0.3
4,832,981	-				-0.6
4,833,003	+				-0.5
4,833,021	+				+1.7
4,833,021	+				-1.2
4,833,021	+				-0.3
4,833,021	+				-1.5
4,833,021	+				+1.7
4,833,021	+				-2.5
4,833,021	+				-1.6
4,833,022	-				+2.9
4,833,022	-				+0.7
4,833,022	-				+2.3
4,833,022	-				-0.9
4,833,024	+				-1.9
4,833,024	+				-1.6
4,833,024	+				-0.3
4,833,024	+				-0.9
4,833,024	+				-1.9
4,833,025	-				-0.3
4,833,025	-				+1.8
4,833,025	-				+1.9
4,833,025	-				+2.3
4,833,047	+				+0.1
4,833,047	+				+0.1
4,833,047	+				+0.3
4,833,047	+				+1.1
4,833,047	+				-0.1
4,833,047	+				-1.3
4,833,047	+				-1.2
4,833,048	-				-1.2
4,833,048	-				+0.1
4,833,048	-				+2.1
4,833,048	-				-1.8
4,833,048	-				-1.6
4,833,048	-				-0.1
4,833,048	-				+0.3
4,833,048	-				+0.7
4,833,048	-				+1.9
4,833,048	-				+0.7
4,833,048	-				-0.1
4,833,048	-				+1.4
4,833,064	-				-1.6
4,833,064	-				+1.7
4,833,153	+		AO353_22075	0.10	-1.6
4,833,153	+		AO353_22075	0.10	+0.7
4,833,377	+		AO353_22075	0.45	-2.6
4,833,378	-		AO353_22075	0.45	-1.4
4,833,378	-		AO353_22075	0.45	-2.3
4,833,378	-		AO353_22075	0.45	-2.8
4,833,416	+		AO353_22075	0.51	-0.9
4,833,417	-		AO353_22075	0.51	-2.1
4,833,497	+		AO353_22075	0.64	-2.1
4,833,497	+		AO353_22075	0.64	-1.3
4,833,498	-		AO353_22075	0.64	-2.8
4,833,498	-		AO353_22075	0.64	-1.3
4,833,498	-		AO353_22075	0.64	-2.9
4,833,511	+		AO353_22075	0.66	+0.3
4,833,697	+				-1.4
4,833,697	+				-0.3
4,833,740	+				-1.3
4,833,740	+				+0.4
4,833,741	-				+0.1
4,833,816	+				-1.9
4,833,816	+				-1.9
4,833,816	+				-0.7
4,833,817	-				+0.7
4,833,960	+		AO353_22080	0.13	+0.4
4,833,960	+		AO353_22080	0.13	-0.7