Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22055

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,828,784	-				-0.7
4,828,818	+				-0.5
4,828,819	-				-0.7
4,828,819	-				-0.5
4,828,929	+		AO353_22050	0.18	+1.4
4,828,930	-		AO353_22050	0.18	+0.2
4,829,050	-		AO353_22050	0.31	-0.9
4,829,130	+		AO353_22050	0.39	-0.9
4,829,131	-		AO353_22050	0.39	+0.5
4,829,131	-		AO353_22050	0.39	-1.8
4,829,131	-		AO353_22050	0.39	+0.7
4,829,131	-		AO353_22050	0.39	-0.3
4,829,191	+		AO353_22050	0.45	-0.3
4,829,192	-		AO353_22050	0.45	+0.3
4,829,192	-		AO353_22050	0.45	-2.3
4,829,286	+		AO353_22050	0.54	+0.7
4,829,286	+		AO353_22050	0.54	+0.4
4,829,286	+		AO353_22050	0.54	+0.5
4,829,287	-		AO353_22050	0.54	-2.3
4,829,287	-		AO353_22050	0.54	-0.9
4,829,287	-		AO353_22050	0.54	-1.6
4,829,287	-		AO353_22050	0.54	+0.1
4,829,287	-		AO353_22050	0.54	+1.1
4,829,287	-		AO353_22050	0.54	+0.7
4,829,287	-		AO353_22050	0.54	-1.1
4,829,403	+		AO353_22050	0.66	-0.9
4,829,405	+		AO353_22050	0.66	+0.5
4,829,406	-		AO353_22050	0.66	-0.7
4,829,678	-				+0.4
4,829,678	-				+1.4
4,829,721	+				+0.4
4,829,722	-				-0.0
4,829,722	-				-1.5
4,829,782	+				+0.7
4,829,812	+				-0.1
4,829,812	+				-0.7
4,829,813	-				-1.3
4,829,848	+		AO353_22055	0.11	-2.5
4,829,848	+		AO353_22055	0.11	+0.4
4,829,848	+		AO353_22055	0.11	-0.9
4,829,849	-		AO353_22055	0.11	-0.3
4,829,849	-		AO353_22055	0.11	+0.3
4,829,921	+		AO353_22055	0.19	+0.9
4,829,921	+		AO353_22055	0.19	-0.7
4,830,109	+		AO353_22055	0.40	+1.1
4,830,109	+				+1.0
4,830,109	+		AO353_22055	0.40	-2.6
4,830,171	-		AO353_22055	0.47	-1.1
4,830,171	-		AO353_22055	0.47	-0.4
4,830,277	+		AO353_22055	0.59	-0.1
4,830,278	-		AO353_22055	0.59	+0.2
4,830,295	-		AO353_22055	0.61	-1.6
4,830,343	-		AO353_22055	0.66	-2.3
4,830,350	-		AO353_22055	0.67	-0.5
4,830,440	+		AO353_22055	0.77	-1.2
4,830,440	+		AO353_22055	0.77	+1.3
4,830,452	-		AO353_22055	0.79	-0.4
4,830,510	+		AO353_22055	0.85	-1.3
4,830,533	-		AO353_22055	0.88	-1.9
4,831,116	-				+0.3
4,831,131	-				-1.2
4,831,131	-				-0.2
4,831,131	-				-0.9
4,831,131	-				-0.3
4,831,131	-				-0.5
4,831,131	-				+1.9
4,831,131	-				+0.1
4,831,131	-				-0.3
4,831,135	-				-0.1
4,831,135	-				+1.0
4,831,161	-				+0.1
4,831,184	+				+0.2
4,831,229	-				+1.4
4,831,229	-				+0.5
4,831,242	+				-0.5
4,831,420	+				-0.6
4,831,421	-				+0.3
4,831,421	-				+1.7
4,831,421	-				+1.3
4,831,478	-				+0.1
4,831,478	-				-1.6
4,831,478	-				-0.1