Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21605

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,731,505	-		AO353_21600	0.55	-1.0
4,731,606	+		AO353_21600	0.61	-1.1
4,731,606	+		AO353_21600	0.61	+0.7
4,731,606	+		AO353_21600	0.61	+0.4
4,731,606	+		AO353_21600	0.61	-1.9
4,731,607	-		AO353_21600	0.62	-0.3
4,731,607	-		AO353_21600	0.62	+1.1
4,731,607	-		AO353_21600	0.62	+0.3
4,731,607	-		AO353_21600	0.62	+0.4
4,731,607	-		AO353_21600	0.62	-0.7
4,731,608	+		AO353_21600	0.62	-0.6
4,731,608	+		AO353_21600	0.62	-2.3
4,731,608	+		AO353_21600	0.62	+1.5
4,731,609	-		AO353_21600	0.62	-0.2
4,731,693	+		AO353_21600	0.67	-0.9
4,731,751	+		AO353_21600	0.70	-1.6
4,732,233	-				-1.5
4,732,233	-				-0.3
4,732,245	+				+1.5
4,732,245	+				-2.4
4,732,245	+				+0.5
4,732,280	+				-0.0
4,732,281	-				+0.5
4,732,362	-				+1.5
4,732,389	-				+0.7
4,735,099	-				-1.0
4,735,356	-				+0.3
4,735,356	-				+0.7
4,735,361	-				+1.6
4,735,441	-				-0.3
4,735,874	+				-0.5
4,735,875	-				+0.3
4,735,875	-				-2.9
4,735,876	+				+1.4
4,735,876	+				+3.3
4,735,876	+				-1.6
4,735,877	-				+2.0
4,735,877	-				+1.9
4,735,954	+				+0.6
4,735,955	-				+0.7
4,735,955	-				+0.2
4,735,955	-				+0.4
4,735,955	-				+2.1
4,735,955	-				-1.6
4,735,955	-				-0.3
4,735,955	-				-0.9
4,735,955	-				+1.0
4,735,955	-				-2.6
4,735,958	+				+2.3
4,735,958	+				-1.3