Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20815

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,557,210	+				+0.4
4,557,210	+				-0.2
4,557,210	+				+0.3
4,557,210	+				-2.0
4,557,210	+				+0.4
4,557,210	+				-0.0
4,557,211	-				-2.0
4,557,211	-				+0.4
4,557,233	+				+0.8
4,557,233	+				-0.3
4,557,234	-				-0.2
4,557,234	-				-0.0
4,557,320	+				-2.9
4,557,371	+				-0.9
4,557,371	+				+0.3
4,557,371	+				+1.0
4,557,371	+				-0.5
4,557,372	-				+1.1
4,557,408	+				-0.0
4,557,408	+				+0.2
4,557,409	-				+0.1
4,557,409	-				-2.0
4,557,409	-				-0.5
4,557,415	+				+1.9
4,557,415	+				-1.7
4,557,415	+				+0.1
4,557,415	+				+1.6
4,557,415	+				-0.0
4,557,416	-				-0.5
4,557,416	-				-2.4
4,557,416	-				+1.1
4,557,421	+				+0.8
4,557,422	-				-2.2
4,557,450	+				-0.8
4,557,450	+				-0.6
4,557,450	+				+0.3
4,557,451	-				-1.5
4,557,451	-				+1.2
4,557,451	-				-1.1
4,557,451	-				+0.4
4,557,516	+				-0.2
4,557,516	+				+0.8
4,557,516	+				-0.8
4,557,516	+				-0.9
4,557,516	+				+0.1
4,557,516	+				+0.5
4,557,516	+				+0.1
4,557,516	+				-1.5
4,557,516	+				+0.0
4,557,516	+				-0.2
4,557,516	+				+1.5
4,557,516	+				-1.4
4,557,516	+				-2.2
4,557,516	+				+1.1
4,557,516	+				-1.5
4,557,516	+				-1.7
4,557,517	-				+1.8
4,557,517	-				+0.2
4,557,517	-				-0.8
4,557,517	-				+0.6
4,557,517	-				+0.1
4,557,517	-				-0.3
4,557,517	-				-1.6
4,557,517	-				+0.6
4,557,517	-				-0.2
4,557,517	-				+0.1
4,557,517	-				+0.8
4,557,517	-				-0.8
4,557,517	-				+1.2
4,557,517	-				-1.5
4,557,517	-				-0.8
4,557,517	-				-0.1
4,557,517	-				+1.5
4,557,517	-				-0.6
4,557,528	+				+0.3
4,557,567	+		AO353_20810	0.11	-1.5
4,557,567	+		AO353_20810	0.11	-0.4
4,557,675	-		AO353_20810	0.35	-1.2
4,557,821	-		AO353_20810	0.67	+0.7
4,557,970	+				-0.8
4,557,971	-				+0.3
4,558,051	+				-1.9
4,558,051	+				-1.1
4,558,052	-				-3.4
4,558,052	-				-1.5
4,558,061	+				+1.4
4,558,159	+				-0.5
4,558,159	+				+0.8
4,558,184	+				-1.0
4,558,184	+				-2.0
4,558,185	-				+1.8
4,558,185	-				-1.0
4,558,185	-				-3.5
4,558,185	-				+1.7
4,558,185	-				-0.5
4,558,185	-				+0.4
4,558,185	-				-0.2
4,558,191	-				-1.8
4,558,191	-				+1.5
4,558,191	-				-1.8
4,558,191	-				-0.2
4,558,191	-				-2.3
4,558,246	+				-0.2
4,558,635	+		AO353_20815	0.45	-0.2
4,558,636	-		AO353_20815	0.45	-2.8
4,558,676	+		AO353_20815	0.49	-1.7
4,558,676	+		AO353_20815	0.49	-0.4
4,558,677	-		AO353_20815	0.49	-0.9
4,558,677	-		AO353_20815	0.49	-0.2
4,558,834	+		AO353_20815	0.66	-1.2
4,558,860	+		AO353_20815	0.68	-1.8
4,559,023	-		AO353_20815	0.85	-0.9
4,559,159	+				-0.0
4,559,159	+				-0.2
4,559,159	+				-1.0
4,559,160	-				+1.2
4,559,160	-				-1.5
4,559,160	-				-0.6
4,559,174	+				+1.8
4,559,218	+				+0.8
4,559,218	+				-0.5
4,559,219	-				-0.5
4,559,219	-				-2.0
4,559,273	+				+0.2
4,559,273	+				+1.4
4,559,273	+				-2.4
4,559,273	+				+0.8
4,559,273	+				-1.2
4,559,273	+				+0.1
4,559,273	+				-1.2
4,559,274	-				+0.3
4,559,274	-				+0.2
4,559,715	+		AO353_20820	0.32	-0.8
4,559,715	+				-1.2
4,559,715	+		AO353_20820	0.32	-0.4
4,559,715	+		AO353_20820	0.32	-0.8
4,559,715	+		AO353_20820	0.32	+0.1
4,559,715	+		AO353_20820	0.32	+3.1
4,559,715	+		AO353_20820	0.32	+0.2
4,559,716	-		AO353_20820	0.32	-1.5
4,559,716	-		AO353_20820	0.32	-0.6
4,559,716	-		AO353_20820	0.32	-0.6
4,559,716	-		AO353_20820	0.32	-0.3
4,559,716	-		AO353_20820	0.32	-1.2
4,559,716	-		AO353_20820	0.32	-0.0
4,559,716	-		AO353_20820	0.32	+1.0
4,559,716	-		AO353_20820	0.32	+0.6
4,559,716	-				-0.2
4,559,816	+		AO353_20820	0.38	-1.4
4,559,817	-		AO353_20820	0.38	-0.1
4,559,817	-		AO353_20820	0.38	-1.9
4,559,817	-		AO353_20820	0.38	+1.0
4,559,817	-				-0.8
4,559,817	-		AO353_20820	0.38	-0.5
4,559,817	-		AO353_20820	0.38	-0.3
4,559,817	-		AO353_20820	0.38	-1.3
4,559,817	-		AO353_20820	0.38	-1.8
4,559,818	+		AO353_20820	0.39	+0.1
4,559,818	+		AO353_20820	0.39	-2.4
4,559,819	-		AO353_20820	0.39	+0.7
4,559,819	-		AO353_20820	0.39	+1.4
4,559,912	+		AO353_20820	0.45	-0.8
4,559,912	+		AO353_20820	0.45	+1.6
4,559,912	+		AO353_20820	0.45	+0.5
4,559,912	+		AO353_20820	0.45	+0.4
4,559,912	+		AO353_20820	0.45	+1.5
4,559,913	-		AO353_20820	0.45	-0.9
4,559,913	-		AO353_20820	0.45	+1.2
4,559,913	-		AO353_20820	0.45	+0.1
4,559,913	-		AO353_20820	0.45	-0.1
4,559,913	-		AO353_20820	0.45	+0.8
4,559,913	-		AO353_20820	0.45	+1.5