Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18450

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
4,063,393	-		AO353_18440	0.69	+1.8
4,063,428	+		AO353_18440	0.71	-0.0
4,063,428	+		AO353_18440	0.71	-0.0
4,063,428	+		AO353_18440	0.71	-0.9
4,063,429	-		AO353_18440	0.71	+0.1
4,063,739	-				+1.0
4,063,826	-				+0.4
4,063,837	+				+2.1
4,063,837	+				-1.8
4,063,837	+				-1.3
4,063,838	-				-2.3
4,063,838	-				-0.6
4,063,894	+				+0.8
4,063,894	+				-0.0
4,063,894	+				+1.6
4,063,894	+				+0.8
4,063,895	-				+1.1
4,063,895	-				+2.0
4,063,895	-				-1.8
4,063,895	-				-2.2
4,063,895	-				-1.2
4,063,970	+				+0.4
4,063,970	+				+0.5
4,063,971	-				-0.5
4,064,002	+				-0.2
4,064,002	+				+0.1
4,064,003	-				-2.6
4,064,015	+				+1.5
4,064,015	+				-0.6
4,064,016	-				-0.7
4,064,016	-				-0.4
4,064,016	-				-0.6
4,064,016	-				+1.3
4,064,016	-				+0.7
4,064,016	-				-1.4
4,064,016	-				+1.0
4,064,016	-				+0.3
4,064,036	+				+0.4
4,064,036	+				-2.1
4,064,037	-				+1.0
4,064,058	+				-0.5
4,064,058	+				-1.0
4,064,059	-				+1.7
4,064,059	-				-0.9
4,064,061	+				+1.0
4,064,061	+				+1.4
4,064,061	+				+1.0
4,064,061	+				-1.3
4,064,061	+				+0.2
4,064,061	+				+0.7
4,064,061	+				+0.2
4,064,061	+				+0.6
4,064,061	+				-0.9
4,064,062	-				+0.7
4,064,062	-				+0.1
4,064,062	-				+0.7
4,064,062	-				-0.0
4,064,062	-				-2.5
4,064,062	-				-0.2
4,064,063	+				+0.7
4,064,063	+				+2.3
4,064,131	+		AO353_18445	0.11	+0.1
4,064,131	+		AO353_18445	0.11	+0.2
4,064,131	+		AO353_18445	0.11	-1.6
4,064,132	-		AO353_18445	0.12	+0.5
4,064,132	-		AO353_18445	0.12	-0.3
4,064,132	-		AO353_18445	0.12	-1.3
4,064,132	-		AO353_18445	0.12	-1.6
4,064,132	-		AO353_18445	0.12	+0.7
4,064,132	-		AO353_18445	0.12	-0.3
4,064,132	-		AO353_18445	0.12	-1.0
4,064,132	-		AO353_18445	0.12	-2.7
4,064,132	-		AO353_18445	0.12	+0.2
4,064,190	+		AO353_18445	0.32	-0.6
4,064,191	-		AO353_18445	0.32	-1.3
4,064,191	-		AO353_18445	0.32	+0.1
4,064,253	+		AO353_18445	0.54	-1.1
4,064,254	-		AO353_18445	0.54	-0.3
4,064,254	-		AO353_18445	0.54	-2.7
4,064,254	-		AO353_18445	0.54	+0.4
4,064,254	-		AO353_18445	0.54	-0.1
4,064,254	-		AO353_18445	0.54	+1.0
4,064,315	+		AO353_18445	0.75	-0.6
4,064,316	-		AO353_18445	0.76	+0.7
4,064,316	-		AO353_18445	0.76	-2.0
4,064,316	-		AO353_18445	0.76	-0.6
4,064,316	-		AO353_18445	0.76	-0.6
4,064,316	-		AO353_18445	0.76	-1.6
4,064,373	+				-0.2
4,064,373	+				-1.0
4,064,373	+				-1.0
4,064,373	+				-0.2
4,064,373	+				-1.0
4,064,374	-				-0.8
4,064,374	-				+0.1
4,064,533	+		AO353_18450	0.17	-0.6
4,064,533	+		AO353_18450	0.17	-1.0
4,064,718	+		AO353_18450	0.38	-0.0
4,064,718	+		AO353_18450	0.38	+2.6
4,064,718	+		AO353_18450	0.38	-2.0
4,064,719	-		AO353_18450	0.38	+1.1
4,064,719	-		AO353_18450	0.38	+0.4
4,064,719	-		AO353_18450	0.38	-1.0
4,064,719	-		AO353_18450	0.38	+1.1
4,064,753	+		AO353_18450	0.42	-0.0
4,064,753	+		AO353_18450	0.42	-0.9
4,064,754	-		AO353_18450	0.42	-0.2
4,064,754	-		AO353_18450	0.42	+1.6
4,064,834	+		AO353_18450	0.51	-0.1
4,064,835	-		AO353_18450	0.51	+1.0
4,064,835	-		AO353_18450	0.51	+1.4
4,065,282	+				-0.9
4,065,282	+				+0.5
4,065,290	-				-0.4
4,065,366	-				+0.1
4,065,539	+		AO353_18455	0.23	+1.1
4,065,539	+		AO353_18455	0.23	+0.5
4,065,539	+		AO353_18455	0.23	+0.4
4,065,539	+		AO353_18455	0.23	+0.1
4,065,539	+		AO353_18455	0.23	+2.1
4,065,539	+		AO353_18455	0.23	+0.6
4,065,539	+		AO353_18455	0.23	+0.1
4,065,539	+		AO353_18455	0.23	-0.1
4,065,539	+		AO353_18455	0.23	-1.0
4,065,540	-		AO353_18455	0.23	+0.6
4,065,540	-		AO353_18455	0.23	+1.3
4,065,540	-		AO353_18455	0.23	+0.6
4,065,540	-		AO353_18455	0.23	-0.6
4,065,540	-		AO353_18455	0.23	-1.2
4,065,540	-		AO353_18455	0.23	-0.2
4,065,540	-		AO353_18455	0.23	-0.2
4,065,540	-		AO353_18455	0.23	-1.6
4,065,540	-		AO353_18455	0.23	+0.3
4,065,647	+		AO353_18455	0.37	-1.0
4,065,647	+		AO353_18455	0.37	+3.1
4,065,648	-		AO353_18455	0.37	-2.8
4,065,739	+		AO353_18455	0.49	-0.8
4,065,740	-		AO353_18455	0.50	-1.7
4,065,970	+		AO353_18455	0.80	+1.0
4,066,094	+				-0.5
4,066,094	+				-1.6
4,066,095	-				+0.6
4,066,102	+				-1.3
4,066,103	-				-0.8
4,066,150	+				-1.3
4,066,150	+				+0.8
4,066,151	-				-0.9
4,066,192	+				-1.0
4,066,192	+				+1.4
4,066,192	+				-1.5
4,066,192	+				+0.7
4,066,192	+				-0.7
4,066,193	-				-1.3
4,066,193	-				-0.0
4,066,193	-				+0.2
4,066,193	-				+0.1
4,066,193	-				+1.7
4,066,208	+				+1.0
4,066,208	+				+0.5
4,066,209	-				+0.6
4,066,209	-				+0.8
4,066,211	+				-0.3