Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14455

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
3,204,001	+				+0.6
3,204,001	+				-2.0
3,204,002	-				-1.3
3,204,002	-				+2.0
3,204,002	-				+0.3
3,204,002	-				+1.9
3,204,002	-				+0.7
3,204,002	-				+0.2
3,204,002	-				+0.5
3,204,002	-				+1.3
3,204,003	+				+1.4
3,204,003	+				+1.7
3,204,003	+				+1.1
3,204,003	+				-1.1
3,204,003	+				-0.3
3,204,003	+				+1.4
3,204,004	-				+0.3
3,204,004	-				-2.5
3,204,004	-				-0.3
3,204,013	+				+0.8
3,204,013	+				+0.2
3,204,014	-				+0.8
3,204,014	-				-0.3
3,204,152	-		AO353_14450	0.16	-0.1
3,204,180	+		AO353_14450	0.20	-1.9
3,204,180	+		AO353_14450	0.20	+0.7
3,204,180	+		AO353_14450	0.20	+1.5
3,204,180	+		AO353_14450	0.20	-0.7
3,204,180	+		AO353_14450	0.20	-1.0
3,204,180	+		AO353_14450	0.20	-0.5
3,204,180	+		AO353_14450	0.20	+0.1
3,204,181	-		AO353_14450	0.20	-0.2
3,204,181	-		AO353_14450	0.20	+0.6
3,204,181	-		AO353_14450	0.20	+0.3
3,204,181	-		AO353_14450	0.20	+0.1
3,204,222	+		AO353_14450	0.25	-1.1
3,204,223	-		AO353_14450	0.25	-1.9
3,204,223	-		AO353_14450	0.25	-0.2
3,204,223	-		AO353_14450	0.25	-1.3
3,204,420	-		AO353_14450	0.51	-0.3
3,204,420	-		AO353_14450	0.51	-1.0
3,204,420	-		AO353_14450	0.51	-1.3
3,204,420	-		AO353_14450	0.51	+0.1
3,204,837	+				+0.5
3,204,838	-				-0.3
3,204,908	-		AO353_14455	0.12	+0.3
3,205,020	+		AO353_14455	0.25	+0.6
3,205,187	+		AO353_14455	0.45	+1.3
3,205,187	+		AO353_14455	0.45	-1.8
3,205,188	-		AO353_14455	0.45	-0.4
3,205,267	+		AO353_14455	0.54	-0.6
3,205,267	+		AO353_14455	0.54	+1.7
3,205,267	+		AO353_14455	0.54	-1.3
3,205,268	-		AO353_14455	0.54	-0.7
3,205,268	-		AO353_14455	0.54	-1.0
3,205,268	-		AO353_14455	0.54	-1.0
3,205,271	+		AO353_14455	0.55	+1.6
3,205,271	+		AO353_14455	0.55	+0.3
3,205,271	+		AO353_14455	0.55	+0.9
3,205,271	+		AO353_14455	0.55	+0.6
3,205,271	+		AO353_14455	0.55	-0.2
3,205,271	+		AO353_14455	0.55	-0.7
3,205,271	+		AO353_14455	0.55	+1.3
3,205,271	+		AO353_14455	0.55	+0.3
3,205,271	+		AO353_14455	0.55	+0.6
3,205,271	+		AO353_14455	0.55	+0.1
3,205,271	+		AO353_14455	0.55	+1.7
3,205,271	+		AO353_14455	0.55	+1.9
3,205,272	-		AO353_14455	0.55	+0.0
3,205,272	-		AO353_14455	0.55	+0.1
3,205,272	-		AO353_14455	0.55	+1.0
3,205,272	-		AO353_14455	0.55	+0.6
3,205,272	-		AO353_14455	0.55	+0.1
3,205,272	-		AO353_14455	0.55	-1.3
3,205,272	-		AO353_14455	0.55	-0.7
3,205,272	-		AO353_14455	0.55	-2.4
3,205,272	-		AO353_14455	0.55	+0.3
3,205,272	-		AO353_14455	0.55	-0.3
3,205,478	+		AO353_14455	0.79	+0.4
3,205,598	+				-1.3
3,205,598	+				-0.3
3,205,598	+				-0.3
3,205,598	+				+1.3
3,205,598	+				-3.4
3,205,598	+				+1.8
3,205,599	-				-0.3
3,205,599	-				-0.5
3,205,599	-				+1.3
3,205,607	+				-1.1
3,205,634	+				+0.1
3,205,634	+				+1.0
3,205,634	+				+0.5
3,205,634	+				+2.0
3,205,634	+				+1.9
3,205,634	+				+0.3
3,205,634	+				-0.6
3,205,635	-				-0.4
3,205,635	-				+1.3
3,205,635	-				+1.3
3,205,655	+				+0.1
3,205,655	+				-0.6
3,205,671	+				-0.1
3,205,671	+				+0.5
3,205,671	+				-0.9
3,205,672	-				+0.3
3,205,672	-				+0.2
3,205,672	-				+0.1
3,205,728	+				+0.3
3,205,729	-				-0.5
3,205,729	-				+0.1
3,205,729	-				-0.1
3,205,729	-				-1.2
3,205,738	+				-0.9
3,205,739	-				+0.1
3,205,754	+				-1.9
3,205,754	+				-0.2
3,205,754	+				-0.3
3,205,754	+				+0.4
3,205,754	+				+1.6
3,205,755	-				-0.7
3,205,755	-				+0.9
3,205,755	-				+0.1
3,205,864	+				-0.2
3,205,864	+				+0.1
3,205,864	+				+0.8
3,205,864	+				-0.0
3,205,864	+				-0.4
3,205,864	+				+0.7
3,205,864	+				-0.2
3,205,864	+				+0.9
3,205,864	+				+0.8
3,205,864	+				+0.4
3,205,864	+				-1.1
3,205,864	+				+0.7
3,205,864	+				-1.0
3,205,864	+				-1.6
3,205,865	-				+0.6
3,205,865	-				+1.5
3,205,865	-				-2.5
3,205,865	-				+0.3
3,205,865	-				-3.0
3,205,865	-				+0.6
3,205,865	-				-0.7
3,205,865	-				+0.9
3,205,865	-				+0.1
3,205,865	-				+1.2
3,205,865	-				+0.8
3,205,865	-				-0.9
3,205,865	-				-0.7
3,205,865	-				-1.5
3,205,865	-				+0.3
3,205,865	-				-1.5
3,205,877	+				+0.9
3,205,877	+				+1.0
3,205,900	+				+0.8
3,205,901	-				+0.3
3,205,914	+				+0.7
3,205,914	+				-0.8
3,205,914	+				+1.3
3,205,914	+				-0.0
3,205,915	-				+1.3
3,205,915	-				-0.5
3,205,915	-				+0.6
3,205,915	-				+0.1
3,205,952	-		AO353_14460	0.14	+1.3
3,206,022	+		AO353_14460	0.40	-1.3
3,206,022	+		AO353_14460	0.40	+0.4
3,206,022	+		AO353_14460	0.40	-0.2
3,206,022	+		AO353_14460	0.40	-1.0
3,206,022	+		AO353_14460	0.40	-0.6
3,206,022	+		AO353_14460	0.40	-2.6
3,206,022	+		AO353_14460	0.40	+0.4
3,206,023	-		AO353_14460	0.40	-0.5
3,206,023	-		AO353_14460	0.40	-0.3
3,206,023	-		AO353_14460	0.40	-2.0
3,206,023	-		AO353_14460	0.40	-1.0
3,206,023	-		AO353_14460	0.40	-0.4
3,206,023	-		AO353_14460	0.40	-0.3
3,206,023	-		AO353_14460	0.40	-2.4
3,206,023	-		AO353_14460	0.40	-0.3
3,206,023	-		AO353_14460	0.40	+0.3
3,206,023	-		AO353_14460	0.40	-0.6
3,206,071	-		AO353_14460	0.58	+0.9
3,206,071	-		AO353_14460	0.58	-0.2
3,206,071	-		AO353_14460	0.58	+0.2
3,206,078	+		AO353_14460	0.60	-2.4
3,206,078	+		AO353_14460	0.60	-1.4
3,206,078	+		AO353_14460	0.60	-1.3
3,206,079	-		AO353_14460	0.61	-1.0
3,206,237	+				-1.5
3,206,237	+				-0.1
3,206,238	-				-0.3
3,206,238	-				+0.6
3,206,291	+				-0.7
3,206,291	+				+0.5
3,206,291	+				-0.1
3,206,291	+				-0.2
3,206,292	-				-1.0
3,206,301	+				-1.3
3,206,301	+				-1.0
3,206,302	-				+0.5
3,206,308	+				-0.7
3,206,308	+				+0.6
3,206,308	+				-2.2
3,206,309	-				-1.4
3,206,309	-				-2.4
3,206,309	-				+0.9
3,206,309	-				-0.0
3,206,309	-				+0.6
3,206,309	-				-1.5
3,206,309	-				-0.5
3,206,309	-				+0.1
3,206,309	-				-0.7
3,206,489	+		AO353_14465	0.23	-0.5
3,206,489	+		AO353_14465	0.23	-0.6
3,206,489	+		AO353_14465	0.23	-0.1
3,206,490	-		AO353_14465	0.23	+1.7
3,206,490	-		AO353_14465	0.23	+0.9
3,206,490	-		AO353_14465	0.23	-0.0
3,206,490	-		AO353_14465	0.23	+2.8
3,206,490	-		AO353_14465	0.23	-1.5
3,206,490	-		AO353_14465	0.23	+0.3
3,206,579	+		AO353_14465	0.49	-1.7
3,206,579	+		AO353_14465	0.49	-0.7
3,206,579	+		AO353_14465	0.49	+0.7
3,206,580	-		AO353_14465	0.49	-1.6
3,206,580	-		AO353_14465	0.49	-0.1
3,206,580	-		AO353_14465	0.49	+1.5
3,206,580	-		AO353_14465	0.49	+0.6
3,206,580	-		AO353_14465	0.49	-0.5
3,206,598	+		AO353_14465	0.54	+0.6
3,206,598	+		AO353_14465	0.54	-1.5
3,206,598	+		AO353_14465	0.54	+0.7
3,206,599	-		AO353_14465	0.55	-0.5
3,206,599	-		AO353_14465	0.55	-0.1
3,206,599	-		AO353_14465	0.55	-0.6
3,206,599	-		AO353_14465	0.55	-1.8
3,206,599	-		AO353_14465	0.55	+1.1
3,206,599	-		AO353_14465	0.55	-1.1
3,206,653	-		AO353_14465	0.70	+1.1