Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12680

Experiment: N1B4wt with N2E3m denitrifying replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E3m denitrifying replicate C
2,790,929	+		AO353_12675	0.44	-0.4
2,790,955	+		AO353_12675	0.46	-0.5
2,790,955	+		AO353_12675	0.46	+0.9
2,790,956	-		AO353_12675	0.46	-0.7
2,791,345	+		AO353_12675	0.69	-0.6
2,791,345	+		AO353_12675	0.69	+1.5
2,791,345	+		AO353_12675	0.69	+0.5
2,791,345	+		AO353_12675	0.69	-1.0
2,791,346	-		AO353_12675	0.69	-0.7
2,791,346	-		AO353_12675	0.69	-0.0
2,791,346	-		AO353_12675	0.69	+0.5
2,791,346	-		AO353_12675	0.69	+1.5
2,791,346	-		AO353_12675	0.69	+0.2
2,791,346	-		AO353_12675	0.69	+1.5
2,791,724	+				+0.5
2,791,724	+				-0.7
2,791,724	+				+0.2
2,791,827	+				-0.2
2,791,827	+				+0.8
2,791,827	+				+1.2
2,791,828	-				-0.0
2,791,892	+				+0.7
2,791,892	+				-0.6
2,791,892	+				-0.7
2,791,893	-				+1.5
2,791,933	-		AO353_12680	0.12	-0.9
2,791,950	+		AO353_12680	0.16	-2.2
2,791,950	+		AO353_12680	0.16	-1.3
2,791,950	+		AO353_12680	0.16	+0.5
2,791,950	+		AO353_12680	0.16	-0.5
2,791,950	+		AO353_12680	0.16	+0.5
2,791,950	+		AO353_12680	0.16	+1.1
2,791,950	+		AO353_12680	0.16	-0.0
2,791,951	-		AO353_12680	0.16	-0.0
2,791,951	-		AO353_12680	0.16	-2.5
2,791,951	-		AO353_12680	0.16	+0.5
2,791,951	-		AO353_12680	0.16	-2.5
2,792,008	+		AO353_12680	0.26	-1.3
2,792,052	+		AO353_12680	0.34	-0.0
2,792,052	+		AO353_12680	0.34	-0.5
2,792,052	+		AO353_12680	0.34	-1.0
2,792,052	+		AO353_12680	0.34	+0.3
2,792,052	+		AO353_12680	0.34	+0.5
2,792,053	-		AO353_12680	0.34	-0.3
2,792,053	-		AO353_12680	0.34	+0.0
2,792,053	-		AO353_12680	0.34	-2.3
2,792,053	-		AO353_12680	0.34	-1.0
2,792,349	+		AO353_12680	0.89	-0.8
2,792,349	+		AO353_12680	0.89	+0.4
2,792,364	+				+0.4
2,792,365	-				-0.5
2,792,432	+				+0.0
2,792,432	+				+1.1
2,792,433	-		AO353_12685	0.10	-1.5
2,792,564	+		AO353_12685	0.62	+0.5
2,792,769	-		AO353_12690	0.38	-1.3
2,792,908	+				+1.7
2,792,908	+				+0.8
2,792,909	-				+0.1
2,792,950	+				-0.3
2,792,951	-				-0.3
2,792,951	-				+0.7
2,792,955	+				-1.5
2,792,955	+				+0.5
2,792,955	+				-0.8
2,792,955	+				+0.2
2,792,955	+				+0.1
2,792,955	+				+1.5
2,792,956	-				-1.0
2,792,956	-				-0.3
2,792,956	-				-0.6
2,792,956	-				-0.5
2,792,967	+				-0.2
2,792,967	+				-0.8
2,792,968	-				+1.3
2,792,968	-				+1.7
2,793,029	+		AO353_12695	0.14	-1.5
2,793,029	+		AO353_12695	0.14	-0.5
2,793,029	+		AO353_12695	0.14	-1.0
2,793,029	+		AO353_12695	0.14	+1.3
2,793,029	+		AO353_12695	0.14	-1.6
2,793,029	+		AO353_12695	0.14	-1.3
2,793,029	+		AO353_12695	0.14	+0.5
2,793,029	+		AO353_12695	0.14	-0.2
2,793,029	+		AO353_12695	0.14	+2.4
2,793,030	-		AO353_12695	0.15	-0.8
2,793,030	-		AO353_12695	0.15	+0.1
2,793,030	-		AO353_12695	0.15	+1.7
2,793,030	-		AO353_12695	0.15	-0.6
2,793,030	-		AO353_12695	0.15	+0.5
2,793,303	+		AO353_12695	0.48	+0.4
2,793,304	-		AO353_12695	0.48	-1.6
2,793,304	-		AO353_12695	0.48	+1.4
2,793,304	-		AO353_12695	0.48	+0.6