Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2677 and DvMF_2678 are separated by 342 nucleotides DvMF_2678 and DvMF_2679 are separated by 294 nucleotides
DvMF_2677: DvMF_2677 - response regulator receiver sensor hybrid histidine kinase (RefSeq), at 3,380,356 to 3,382,266
_2677
DvMF_2678: DvMF_2678 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,382,609 to 3,384,705
_2678
DvMF_2679: DvMF_2679 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,385,000 to 3,386,460
_2679
Position (kb)
3382
3383
3384
3385 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3381.649 kb on - strand, within DvMF_2677 at 3381.664 kb on + strand, within DvMF_2677 at 3382.041 kb on + strand, within DvMF_2677 at 3382.105 kb on - strand at 3382.115 kb on - strand at 3382.159 kb on - strand at 3382.263 kb on - strand at 3382.268 kb on - strand at 3382.706 kb on + strand at 3382.782 kb on - strand at 3382.943 kb on + strand, within DvMF_2678 at 3382.943 kb on + strand, within DvMF_2678 at 3383.029 kb on + strand, within DvMF_2678 at 3383.099 kb on + strand, within DvMF_2678 at 3383.156 kb on + strand, within DvMF_2678 at 3383.266 kb on + strand, within DvMF_2678 at 3383.274 kb on - strand, within DvMF_2678 at 3383.317 kb on - strand, within DvMF_2678 at 3383.317 kb on - strand, within DvMF_2678 at 3383.432 kb on + strand, within DvMF_2678 at 3383.516 kb on - strand, within DvMF_2678 at 3383.523 kb on + strand, within DvMF_2678 at 3383.535 kb on + strand, within DvMF_2678 at 3383.552 kb on + strand, within DvMF_2678 at 3384.463 kb on + strand, within DvMF_2678 at 3384.567 kb on - strand at 3384.845 kb on + strand at 3384.876 kb on - strand at 3385.029 kb on + strand at 3385.183 kb on - strand, within DvMF_2679 at 3385.194 kb on + strand, within DvMF_2679 at 3385.396 kb on + strand, within DvMF_2679 at 3385.542 kb on + strand, within DvMF_2679 at 3385.657 kb on + strand, within DvMF_2679 at 3385.670 kb on - strand, within DvMF_2679
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,381,649 - DvMF_2677 0.68 -0.5 3,381,664 + DvMF_2677 0.68 -0.4 3,382,041 + DvMF_2677 0.88 +0.6 3,382,105 - +0.1 3,382,115 - +0.1 3,382,159 - +0.3 3,382,263 - +0.1 3,382,268 - -0.4 3,382,706 + -1.5 3,382,782 - -1.8 3,382,943 + DvMF_2678 0.16 -1.2 3,382,943 + DvMF_2678 0.16 -1.7 3,383,029 + DvMF_2678 0.20 -1.3 3,383,099 + DvMF_2678 0.23 -1.0 3,383,156 + DvMF_2678 0.26 -2.1 3,383,266 + DvMF_2678 0.31 -1.2 3,383,274 - DvMF_2678 0.32 -1.8 3,383,317 - DvMF_2678 0.34 -1.0 3,383,317 - DvMF_2678 0.34 -3.9 3,383,432 + DvMF_2678 0.39 -2.0 3,383,516 - DvMF_2678 0.43 -1.0 3,383,523 + DvMF_2678 0.44 -1.0 3,383,535 + DvMF_2678 0.44 -1.3 3,383,552 + DvMF_2678 0.45 -0.9 3,384,463 + DvMF_2678 0.88 -0.8 3,384,567 - -0.7 3,384,845 + -0.3 3,384,876 - -0.4 3,385,029 + -1.5 3,385,183 - DvMF_2679 0.13 -1.9 3,385,194 + DvMF_2679 0.13 -2.0 3,385,396 + DvMF_2679 0.27 -1.3 3,385,542 + DvMF_2679 0.37 -0.3 3,385,657 + DvMF_2679 0.45 -2.5 3,385,670 - DvMF_2679 0.46 -0.4
Or see this region's nucleotide sequence