Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2589 and DvMF_2590 are separated by 595 nucleotides DvMF_2590 and DvMF_2591 are separated by 165 nucleotides DvMF_2591 and DvMF_2592 are separated by 109 nucleotides
DvMF_2589: DvMF_2589 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 3,273,801 to 3,274,532
_2589
DvMF_2590: DvMF_2590 - response regulator receiver protein (RefSeq), at 3,275,128 to 3,275,523
_2590
DvMF_2591: DvMF_2591 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 3,275,689 to 3,276,141
_2591
DvMF_2592: DvMF_2592 - two component transcriptional regulator, Fis family (RefSeq), at 3,276,251 to 3,276,637
_2592
Position (kb)
3275
3276 Strain fitness (log2 ratio)
-1
0
1 at 3274.189 kb on - strand, within DvMF_2589 at 3274.282 kb on + strand, within DvMF_2589 at 3274.331 kb on + strand, within DvMF_2589 at 3274.415 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.433 kb on + strand, within DvMF_2589 at 3274.441 kb on - strand, within DvMF_2589 at 3274.523 kb on - strand at 3274.603 kb on - strand at 3274.653 kb on - strand at 3274.754 kb on - strand at 3274.885 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.317 kb on - strand, within DvMF_2590 at 3275.591 kb on - strand at 3275.595 kb on - strand at 3275.687 kb on + strand at 3275.695 kb on - strand at 3275.736 kb on + strand, within DvMF_2591 at 3275.812 kb on + strand, within DvMF_2591 at 3275.869 kb on + strand, within DvMF_2591 at 3276.448 kb on + strand, within DvMF_2592
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,274,189 - DvMF_2589 0.53 +0.2 3,274,282 + DvMF_2589 0.66 -0.6 3,274,331 + DvMF_2589 0.72 -0.3 3,274,415 + DvMF_2589 0.84 -0.4 3,274,433 + DvMF_2589 0.86 -0.8 3,274,433 + DvMF_2589 0.86 -0.2 3,274,433 + DvMF_2589 0.86 -0.5 3,274,441 - DvMF_2589 0.87 -0.6 3,274,523 - -0.3 3,274,603 - -0.3 3,274,653 - -0.4 3,274,754 - +0.0 3,274,885 + -0.6 3,275,145 + -0.4 3,275,145 + -0.2 3,275,145 + -0.1 3,275,317 - DvMF_2590 0.48 +0.1 3,275,591 - -0.6 3,275,595 - -0.8 3,275,687 + -0.4 3,275,695 - -0.3 3,275,736 + DvMF_2591 0.10 -1.3 3,275,812 + DvMF_2591 0.27 -0.6 3,275,869 + DvMF_2591 0.40 -1.0 3,276,448 + DvMF_2592 0.51 -0.8
Or see this region's nucleotide sequence