Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2583 and DvMF_2584 are separated by 3 nucleotides DvMF_2584 and DvMF_2585 are separated by 447 nucleotides DvMF_2585 and DvMF_2586 are separated by 46 nucleotides
DvMF_2583: DvMF_2583 - dihydroxyacetone kinase, L subunit (RefSeq), at 3,267,361 to 3,267,993
_2583
DvMF_2584: DvMF_2584 - phosphoenolpyruvate-protein phosphotransferase (RefSeq), at 3,267,997 to 3,270,537
_2584
DvMF_2585: DvMF_2585 - anti-sigma-28 factor, FlgM (RefSeq), at 3,270,985 to 3,271,296
_2585
DvMF_2586: DvMF_2586 - hypothetical protein (RefSeq), at 3,271,343 to 3,271,759
_2586
Position (kb)
3267
3268
3269
3270
3271 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3267.001 kb on - strand at 3267.001 kb on - strand at 3267.138 kb on - strand at 3267.501 kb on - strand, within DvMF_2583 at 3267.643 kb on - strand, within DvMF_2583 at 3267.934 kb on + strand at 3268.211 kb on - strand at 3268.213 kb on + strand at 3268.269 kb on + strand, within DvMF_2584 at 3268.349 kb on - strand, within DvMF_2584 at 3268.371 kb on - strand, within DvMF_2584 at 3268.416 kb on + strand, within DvMF_2584 at 3268.597 kb on + strand, within DvMF_2584 at 3268.918 kb on - strand, within DvMF_2584 at 3269.594 kb on - strand, within DvMF_2584 at 3269.714 kb on - strand, within DvMF_2584 at 3269.918 kb on + strand, within DvMF_2584 at 3270.017 kb on - strand, within DvMF_2584 at 3270.204 kb on - strand, within DvMF_2584 at 3270.258 kb on + strand, within DvMF_2584 at 3270.308 kb on - strand at 3270.444 kb on - strand at 3270.469 kb on - strand at 3270.928 kb on - strand at 3271.141 kb on + strand, within DvMF_2585 at 3271.250 kb on - strand, within DvMF_2585 at 3271.261 kb on - strand, within DvMF_2585 at 3271.341 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,267,001 - -0.2 3,267,001 - +0.0 3,267,138 - -0.3 3,267,501 - DvMF_2583 0.22 -0.0 3,267,643 - DvMF_2583 0.45 +0.2 3,267,934 + -6.4 3,268,211 - +0.3 3,268,213 + -0.3 3,268,269 + DvMF_2584 0.11 +1.3 3,268,349 - DvMF_2584 0.14 +0.1 3,268,371 - DvMF_2584 0.15 +0.0 3,268,416 + DvMF_2584 0.16 +0.5 3,268,597 + DvMF_2584 0.24 +0.3 3,268,918 - DvMF_2584 0.36 +0.1 3,269,594 - DvMF_2584 0.63 +0.3 3,269,714 - DvMF_2584 0.68 -0.1 3,269,918 + DvMF_2584 0.76 +0.1 3,270,017 - DvMF_2584 0.79 +0.1 3,270,204 - DvMF_2584 0.87 +0.0 3,270,258 + DvMF_2584 0.89 -0.4 3,270,308 - +0.3 3,270,444 - -0.2 3,270,469 - +0.0 3,270,928 - +0.5 3,271,141 + DvMF_2585 0.50 -0.8 3,271,250 - DvMF_2585 0.85 -0.8 3,271,261 - DvMF_2585 0.88 -0.7 3,271,341 + -0.7
Or see this region's nucleotide sequence