Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1418

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1417 and DvMF_1418 are separated by 61 nucleotides DvMF_1417: DvMF_1417 - heavy metal translocating P-type ATPase (RefSeq), at 1,730,606 to 1,733,521 _1417 DvMF_1418: DvMF_1418 - hypothetical protein (RefSeq), at 1,733,583 to 1,733,864 _1418 Position (kb) 1733 1734Strain fitness (log2 ratio) -1 0 1at 1732.647 kb on + strand, within DvMF_1417at 1732.655 kb on - strand, within DvMF_1417at 1732.792 kb on - strand, within DvMF_1417at 1732.807 kb on + strand, within DvMF_1417at 1732.951 kb on + strand, within DvMF_1417at 1732.975 kb on - strand, within DvMF_1417at 1733.047 kb on - strand, within DvMF_1417at 1733.206 kb on + strand, within DvMF_1417at 1733.352 kb on + strandat 1733.576 kb on + strandat 1733.616 kb on - strand, within DvMF_1418at 1733.643 kb on - strand, within DvMF_1418at 1733.963 kb on + strandat 1734.364 kb on + strandat 1734.388 kb on - strandat 1734.474 kb on + strandat 1734.504 kb on - strandat 1734.511 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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1,732,647 + DvMF_1417 0.70 -0.9
1,732,655 - DvMF_1417 0.70 +0.9
1,732,792 - DvMF_1417 0.75 -0.3
1,732,807 + DvMF_1417 0.75 -0.6
1,732,951 + DvMF_1417 0.80 -0.5
1,732,975 - DvMF_1417 0.81 -0.2
1,733,047 - DvMF_1417 0.84 -0.3
1,733,206 + DvMF_1417 0.89 -0.3
1,733,352 + -0.0
1,733,576 + -0.8
1,733,616 - DvMF_1418 0.12 -0.8
1,733,643 - DvMF_1418 0.21 -1.5
1,733,963 + -0.1
1,734,364 + -0.2
1,734,388 - -0.2
1,734,474 + -0.3
1,734,504 - +0.4
1,734,511 - -0.3

Or see this region's nucleotide sequence