Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0863 and DvMF_0864 are separated by 536 nucleotides DvMF_0864 and DvMF_0865 are separated by 90 nucleotides DvMF_0865 and DvMF_0866 are separated by 84 nucleotides
DvMF_0863: DvMF_0863 - hypothetical protein (RefSeq), at 1,039,060 to 1,039,740
_0863
DvMF_0864: DvMF_0864 - UTP-GlnB uridylyltransferase, GlnD (RefSeq), at 1,040,277 to 1,043,180
_0864
DvMF_0865: DvMF_0865 - nitrogen regulatory protein P-II (RefSeq), at 1,043,271 to 1,043,609
_0865
DvMF_0866: DvMF_0866 - ammonium transporter (RefSeq), at 1,043,694 to 1,044,902
_0866
Position (kb)
1040
1041
1042
1043
1044 Strain fitness (log2 ratio)
-1
0
1 at 1039.401 kb on - strand, within DvMF_0863 at 1040.295 kb on + strand at 1040.340 kb on + strand at 1040.460 kb on - strand at 1040.460 kb on - strand at 1040.714 kb on + strand, within DvMF_0864 at 1040.882 kb on - strand, within DvMF_0864 at 1040.920 kb on - strand, within DvMF_0864 at 1041.028 kb on + strand, within DvMF_0864 at 1041.137 kb on - strand, within DvMF_0864 at 1041.222 kb on + strand, within DvMF_0864 at 1041.437 kb on - strand, within DvMF_0864 at 1041.524 kb on + strand, within DvMF_0864 at 1041.617 kb on - strand, within DvMF_0864 at 1041.718 kb on - strand, within DvMF_0864 at 1041.722 kb on - strand, within DvMF_0864 at 1042.010 kb on - strand, within DvMF_0864 at 1042.104 kb on - strand, within DvMF_0864 at 1042.104 kb on - strand, within DvMF_0864 at 1042.109 kb on - strand, within DvMF_0864 at 1042.197 kb on + strand, within DvMF_0864 at 1042.383 kb on + strand, within DvMF_0864 at 1042.461 kb on + strand, within DvMF_0864 at 1042.713 kb on + strand, within DvMF_0864 at 1042.733 kb on - strand, within DvMF_0864 at 1042.738 kb on + strand, within DvMF_0864 at 1042.786 kb on + strand, within DvMF_0864 at 1042.833 kb on + strand, within DvMF_0864 at 1043.082 kb on - strand at 1043.369 kb on - strand, within DvMF_0865 at 1043.477 kb on - strand, within DvMF_0865 at 1043.523 kb on + strand, within DvMF_0865 at 1043.877 kb on - strand, within DvMF_0866 at 1043.893 kb on - strand, within DvMF_0866 at 1044.106 kb on - strand, within DvMF_0866
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,039,401 - DvMF_0863 0.50 -1.3 1,040,295 + -0.3 1,040,340 + -0.3 1,040,460 - -0.4 1,040,460 - -1.1 1,040,714 + DvMF_0864 0.15 -0.1 1,040,882 - DvMF_0864 0.21 -0.1 1,040,920 - DvMF_0864 0.22 -0.3 1,041,028 + DvMF_0864 0.26 -0.4 1,041,137 - DvMF_0864 0.30 -0.4 1,041,222 + DvMF_0864 0.33 -0.3 1,041,437 - DvMF_0864 0.40 -0.2 1,041,524 + DvMF_0864 0.43 +0.2 1,041,617 - DvMF_0864 0.46 -0.3 1,041,718 - DvMF_0864 0.50 -0.7 1,041,722 - DvMF_0864 0.50 -0.0 1,042,010 - DvMF_0864 0.60 +1.2 1,042,104 - DvMF_0864 0.63 -0.6 1,042,104 - DvMF_0864 0.63 -0.3 1,042,109 - DvMF_0864 0.63 +0.7 1,042,197 + DvMF_0864 0.66 +0.5 1,042,383 + DvMF_0864 0.73 -0.1 1,042,461 + DvMF_0864 0.75 +0.5 1,042,713 + DvMF_0864 0.84 -0.4 1,042,733 - DvMF_0864 0.85 -0.6 1,042,738 + DvMF_0864 0.85 -0.5 1,042,786 + DvMF_0864 0.86 -0.3 1,042,833 + DvMF_0864 0.88 -0.5 1,043,082 - -0.3 1,043,369 - DvMF_0865 0.29 -0.6 1,043,477 - DvMF_0865 0.61 -0.3 1,043,523 + DvMF_0865 0.74 -0.7 1,043,877 - DvMF_0866 0.15 -0.7 1,043,893 - DvMF_0866 0.16 +0.1 1,044,106 - DvMF_0866 0.34 -0.6
Or see this region's nucleotide sequence