Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_746 and HP15_747 are separated by 165 nucleotides HP15_747 and HP15_748 are separated by 257 nucleotides
HP15_746: HP15_746 - two component transcriptional regulator, winged helix family, at 754,504 to 755,241
_746
HP15_747: HP15_747 - integral membrane sensor signal transduction histidine kinase, at 755,407 to 756,882
_747
HP15_748: HP15_748 - glycerol kinase, at 757,140 to 758,621
_748
Position (kb) 755
756
757 Strain fitness (log2 ratio) -2
-1
0
1
2 at 754.511 kb on + strand at 754.610 kb on + strand, within HP15_746 at 755.008 kb on + strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.124 kb on - strand, within HP15_746 at 755.137 kb on - strand, within HP15_746 at 755.193 kb on + strand at 755.193 kb on + strand at 755.215 kb on + strand at 755.298 kb on + strand at 755.792 kb on + strand, within HP15_747 at 755.925 kb on - strand, within HP15_747 at 756.243 kb on - strand, within HP15_747 at 756.314 kb on + strand, within HP15_747 at 756.317 kb on - strand, within HP15_747 at 756.342 kb on - strand, within HP15_747 at 756.509 kb on + strand, within HP15_747 at 756.851 kb on - strand at 756.872 kb on + strand at 756.877 kb on + strand at 756.891 kb on + strand at 756.896 kb on + strand at 756.954 kb on + strand at 756.959 kb on + strand at 756.962 kb on - strand at 757.169 kb on + strand at 757.336 kb on - strand, within HP15_748 at 757.406 kb on - strand, within HP15_748 at 757.683 kb on - strand, within HP15_748 at 757.727 kb on + strand, within HP15_748 at 757.735 kb on - strand, within HP15_748 at 757.803 kb on + strand, within HP15_748 at 757.803 kb on + strand, within HP15_748
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml remove 754,511 + +1.6 754,610 + HP15_746 0.14 +1.4 755,008 + HP15_746 0.68 +1.5 755,016 - HP15_746 0.69 +1.4 755,016 - HP15_746 0.69 +1.3 755,124 - HP15_746 0.84 +1.3 755,137 - HP15_746 0.86 +1.7 755,193 + +1.2 755,193 + +1.3 755,215 + +2.3 755,298 + +1.0 755,792 + HP15_747 0.26 +0.5 755,925 - HP15_747 0.35 +0.7 756,243 - HP15_747 0.57 +1.4 756,314 + HP15_747 0.61 +2.0 756,317 - HP15_747 0.62 +1.3 756,342 - HP15_747 0.63 +0.4 756,509 + HP15_747 0.75 +1.4 756,851 - +1.5 756,872 + +0.0 756,877 + -1.0 756,891 + +0.1 756,896 + -0.5 756,954 + +0.1 756,959 + +0.0 756,962 - -0.2 757,169 + +0.5 757,336 - HP15_748 0.13 -0.3 757,406 - HP15_748 0.18 +0.2 757,683 - HP15_748 0.37 -2.4 757,727 + HP15_748 0.40 -0.3 757,735 - HP15_748 0.40 -0.5 757,803 + HP15_748 0.45 -0.6 757,803 + HP15_748 0.45 -1.0
Or see this region's nucleotide sequence