Strain Fitness in Marinobacter adhaerens HP15 around HP15_607

Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_606 and HP15_607 are separated by 123 nucleotidesHP15_607 and HP15_608 are separated by 98 nucleotides HP15_606: HP15_606 - rod shape-determining protein RodA-like protein, at 626,817 to 627,959 _606 HP15_607: HP15_607 - rare lipoprotein A family protein, at 628,083 to 628,976 _607 HP15_608: HP15_608 - serine-type D-Ala-D-Ala carboxypeptidase, at 629,075 to 630,199 _608 Position (kb) 628 629Strain fitness (log2 ratio) -2 -1 0 1at 627.972 kb on + strandat 628.436 kb on + strand, within HP15_607at 628.553 kb on + strand, within HP15_607at 628.646 kb on + strand, within HP15_607

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml
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627,972 + -0.3
628,436 + HP15_607 0.39 -2.6
628,553 + HP15_607 0.53 -2.7
628,646 + HP15_607 0.63 -1.1

Or see this region's nucleotide sequence