Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_444 and HP15_445 are separated by 131 nucleotides HP15_445 and HP15_446 are separated by 23 nucleotides
HP15_444: HP15_444 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 447,850 to 449,271
_444
HP15_445: HP15_445 - beta 1,4 glucosyltransferase, at 449,403 to 450,197
_445
HP15_446: HP15_446 - glycosyltransferase, at 450,221 to 451,276
_446
Position (kb) 449
450
451 Strain fitness (log2 ratio) -2
-1
0
1 at 449.436 kb on - strand at 449.526 kb on - strand, within HP15_445 at 449.583 kb on + strand, within HP15_445 at 449.584 kb on - strand, within HP15_445 at 449.680 kb on - strand, within HP15_445 at 449.870 kb on + strand, within HP15_445 at 449.870 kb on + strand, within HP15_445 at 449.878 kb on - strand, within HP15_445 at 449.878 kb on - strand, within HP15_445 at 449.883 kb on - strand, within HP15_445 at 449.915 kb on - strand, within HP15_445 at 450.154 kb on - strand at 450.156 kb on + strand at 450.204 kb on + strand at 450.204 kb on + strand at 450.334 kb on + strand, within HP15_446 at 450.334 kb on + strand, within HP15_446 at 450.342 kb on - strand, within HP15_446 at 450.352 kb on - strand, within HP15_446 at 450.352 kb on - strand, within HP15_446 at 450.352 kb on - strand, within HP15_446 at 450.391 kb on - strand, within HP15_446 at 450.443 kb on + strand, within HP15_446 at 450.465 kb on - strand, within HP15_446 at 450.485 kb on + strand, within HP15_446 at 450.516 kb on + strand, within HP15_446 at 450.542 kb on + strand, within HP15_446 at 450.550 kb on - strand, within HP15_446 at 450.553 kb on - strand, within HP15_446 at 450.611 kb on + strand, within HP15_446 at 450.701 kb on - strand, within HP15_446 at 450.702 kb on + strand, within HP15_446 at 450.707 kb on - strand, within HP15_446 at 450.707 kb on - strand, within HP15_446 at 450.763 kb on + strand, within HP15_446 at 450.783 kb on - strand, within HP15_446 at 450.823 kb on - strand, within HP15_446 at 450.918 kb on - strand, within HP15_446 at 450.937 kb on - strand, within HP15_446 at 450.990 kb on + strand, within HP15_446 at 451.087 kb on - strand, within HP15_446
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml remove 449,436 - -0.3 449,526 - HP15_445 0.15 -0.6 449,583 + HP15_445 0.23 +0.0 449,584 - HP15_445 0.23 +0.3 449,680 - HP15_445 0.35 -0.0 449,870 + HP15_445 0.59 -0.4 449,870 + HP15_445 0.59 +0.0 449,878 - HP15_445 0.60 +1.0 449,878 - HP15_445 0.60 -0.0 449,883 - HP15_445 0.60 +0.5 449,915 - HP15_445 0.64 +0.1 450,154 - -0.3 450,156 + -0.4 450,204 + -0.1 450,204 + -0.2 450,334 + HP15_446 0.11 -0.8 450,334 + HP15_446 0.11 -1.1 450,342 - HP15_446 0.11 -0.8 450,352 - HP15_446 0.12 -0.9 450,352 - HP15_446 0.12 -0.9 450,352 - HP15_446 0.12 -0.2 450,391 - HP15_446 0.16 -0.5 450,443 + HP15_446 0.21 +0.1 450,465 - HP15_446 0.23 -1.1 450,485 + HP15_446 0.25 -1.1 450,516 + HP15_446 0.28 -0.9 450,542 + HP15_446 0.30 -1.6 450,550 - HP15_446 0.31 -0.3 450,553 - HP15_446 0.31 -0.8 450,611 + HP15_446 0.37 -2.1 450,701 - HP15_446 0.45 +0.0 450,702 + HP15_446 0.46 -0.5 450,707 - HP15_446 0.46 -0.5 450,707 - HP15_446 0.46 -0.4 450,763 + HP15_446 0.51 -1.7 450,783 - HP15_446 0.53 -0.3 450,823 - HP15_446 0.57 -1.5 450,918 - HP15_446 0.66 -0.6 450,937 - HP15_446 0.68 -0.1 450,990 + HP15_446 0.73 -0.8 451,087 - HP15_446 0.82 -0.4
Or see this region's nucleotide sequence