Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2632 and HP15_2633 overlap by 29 nucleotides HP15_2633 and HP15_2634 are separated by 99 nucleotides HP15_2634 and HP15_2635 are separated by 6 nucleotides
HP15_2632: HP15_2632 - ribonuclease Z, at 2,783,366 to 2,784,445
_2632
HP15_2633: HP15_2633 - conserved hypothetical protein, secreted, at 2,784,417 to 2,785,247
_2633
HP15_2634: HP15_2634 - lipoprotein, at 2,785,347 to 2,786,054
_2634
HP15_2635: HP15_2635 - transcriptional regulator, LysR-family protein, at 2,786,061 to 2,786,960
_2635
Position (kb)
2785
2786
2787 Strain fitness (log2 ratio)
-1
0
1 at 2784.412 kb on + strand at 2784.560 kb on + strand, within HP15_2633 at 2784.740 kb on - strand, within HP15_2633 at 2784.748 kb on + strand, within HP15_2633 at 2784.756 kb on - strand, within HP15_2633 at 2784.820 kb on + strand, within HP15_2633 at 2784.828 kb on - strand, within HP15_2633 at 2784.828 kb on - strand, within HP15_2633 at 2784.870 kb on + strand, within HP15_2633 at 2784.886 kb on - strand, within HP15_2633 at 2784.936 kb on + strand, within HP15_2633 at 2784.936 kb on + strand, within HP15_2633 at 2784.936 kb on + strand, within HP15_2633 at 2784.944 kb on - strand, within HP15_2633 at 2784.946 kb on + strand, within HP15_2633 at 2784.946 kb on + strand, within HP15_2633 at 2784.954 kb on - strand, within HP15_2633 at 2785.021 kb on - strand, within HP15_2633 at 2785.115 kb on - strand, within HP15_2633 at 2785.118 kb on + strand, within HP15_2633 at 2785.192 kb on - strand at 2785.587 kb on + strand, within HP15_2634 at 2785.661 kb on + strand, within HP15_2634 at 2785.705 kb on + strand, within HP15_2634 at 2785.732 kb on + strand, within HP15_2634 at 2785.743 kb on + strand, within HP15_2634 at 2785.783 kb on + strand, within HP15_2634 at 2785.813 kb on + strand, within HP15_2634 at 2785.961 kb on + strand, within HP15_2634 at 2785.964 kb on - strand, within HP15_2634 at 2785.964 kb on - strand, within HP15_2634 at 2786.036 kb on - strand at 2786.115 kb on - strand at 2786.136 kb on + strand at 2786.220 kb on + strand, within HP15_2635 at 2786.230 kb on - strand, within HP15_2635 at 2786.275 kb on + strand, within HP15_2635 at 2786.313 kb on - strand, within HP15_2635 at 2786.350 kb on - strand, within HP15_2635 at 2786.451 kb on + strand, within HP15_2635 at 2786.613 kb on + strand, within HP15_2635 at 2786.698 kb on + strand, within HP15_2635 at 2786.715 kb on - strand, within HP15_2635 at 2786.785 kb on + strand, within HP15_2635 at 2786.830 kb on + strand, within HP15_2635 at 2786.830 kb on + strand, within HP15_2635 at 2786.867 kb on - strand, within HP15_2635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml remove 2,784,412 + -0.2 2,784,560 + HP15_2633 0.17 +0.1 2,784,740 - HP15_2633 0.39 +0.3 2,784,748 + HP15_2633 0.40 +0.7 2,784,756 - HP15_2633 0.41 -0.1 2,784,820 + HP15_2633 0.48 +0.1 2,784,828 - HP15_2633 0.49 +0.6 2,784,828 - HP15_2633 0.49 +0.9 2,784,870 + HP15_2633 0.55 -0.8 2,784,886 - HP15_2633 0.56 -0.1 2,784,936 + HP15_2633 0.62 +0.1 2,784,936 + HP15_2633 0.62 +0.7 2,784,936 + HP15_2633 0.62 +0.6 2,784,944 - HP15_2633 0.63 -0.1 2,784,946 + HP15_2633 0.64 -0.7 2,784,946 + HP15_2633 0.64 +0.2 2,784,954 - HP15_2633 0.65 -0.1 2,785,021 - HP15_2633 0.73 +0.8 2,785,115 - HP15_2633 0.84 +0.6 2,785,118 + HP15_2633 0.84 -0.1 2,785,192 - +0.3 2,785,587 + HP15_2634 0.34 +0.2 2,785,661 + HP15_2634 0.44 +0.4 2,785,705 + HP15_2634 0.51 -1.1 2,785,732 + HP15_2634 0.54 +1.0 2,785,743 + HP15_2634 0.56 +0.5 2,785,783 + HP15_2634 0.62 -1.6 2,785,813 + HP15_2634 0.66 -0.3 2,785,961 + HP15_2634 0.87 +0.7 2,785,964 - HP15_2634 0.87 +0.6 2,785,964 - HP15_2634 0.87 +1.1 2,786,036 - -0.8 2,786,115 - -0.9 2,786,136 + +0.7 2,786,220 + HP15_2635 0.18 -1.2 2,786,230 - HP15_2635 0.19 -1.0 2,786,275 + HP15_2635 0.24 +0.1 2,786,313 - HP15_2635 0.28 +0.1 2,786,350 - HP15_2635 0.32 +0.3 2,786,451 + HP15_2635 0.43 -0.2 2,786,613 + HP15_2635 0.61 -0.2 2,786,698 + HP15_2635 0.71 -0.2 2,786,715 - HP15_2635 0.73 -0.0 2,786,785 + HP15_2635 0.80 +0.7 2,786,830 + HP15_2635 0.85 -0.9 2,786,830 + HP15_2635 0.85 +0.0 2,786,867 - HP15_2635 0.90 +0.5
Or see this region's nucleotide sequence