Strain Fitness in Marinobacter adhaerens HP15 around HP15_1143
Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 0.0004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,175,120 | + | HP15_1141 | 0.12 | +0.4 | |
1,175,248 | - | HP15_1141 | 0.28 | -0.8 | |
1,175,265 | - | HP15_1141 | 0.30 | -0.4 | |
1,175,287 | - | HP15_1141 | 0.33 | +0.7 | |
1,175,304 | - | HP15_1141 | 0.35 | +0.0 | |
1,175,319 | + | HP15_1141 | 0.37 | +0.6 | |
1,175,333 | - | HP15_1141 | 0.39 | +1.1 | |
1,175,555 | + | HP15_1141 | 0.68 | +0.2 | |
1,175,622 | + | HP15_1141 | 0.76 | +0.4 | |
1,175,663 | - | HP15_1141 | 0.82 | -0.4 | |
1,175,711 | - | HP15_1141 | 0.88 | +0.3 | |
1,175,788 | + | +0.0 | |||
1,177,668 | - | +0.3 | |||
1,177,897 | + | HP15_1144 | 0.22 | +0.3 | |
1,177,900 | - | HP15_1144 | 0.22 | -0.1 | |
1,177,906 | - | HP15_1144 | 0.22 | +0.5 | |
1,177,996 | - | HP15_1144 | 0.29 | +0.3 | |
1,178,002 | - | HP15_1144 | 0.29 | -2.3 | |
1,178,110 | + | HP15_1144 | 0.36 | -0.7 | |
1,178,110 | + | HP15_1144 | 0.36 | -0.1 | |
1,178,115 | + | HP15_1144 | 0.37 | +0.5 | |
1,178,123 | - | HP15_1144 | 0.37 | +0.1 | |
1,178,289 | + | HP15_1144 | 0.49 | -0.9 | |
1,178,400 | + | HP15_1144 | 0.56 | +0.6 | |
1,178,410 | + | HP15_1144 | 0.57 | -0.7 | |
1,178,413 | - | HP15_1144 | 0.57 | +0.1 | |
1,178,413 | - | HP15_1144 | 0.57 | +0.2 | |
1,178,413 | - | HP15_1144 | 0.57 | +0.3 |
Or see this region's nucleotide sequence