Strain Fitness in Marinobacter adhaerens HP15 around HP15_1141
Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Polymyxin B sulfate 0.0004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,174,039 | - | HP15_1140 | 0.76 | +0.1 | |
1,174,041 | + | HP15_1140 | 0.76 | -0.4 | |
1,174,046 | + | HP15_1140 | 0.76 | -0.7 | |
1,174,073 | + | HP15_1140 | 0.77 | -0.2 | |
1,174,211 | + | HP15_1140 | 0.82 | +0.8 | |
1,174,263 | - | HP15_1140 | 0.84 | +1.1 | |
1,174,307 | + | HP15_1140 | 0.85 | -0.5 | |
1,174,331 | + | HP15_1140 | 0.86 | -0.4 | |
1,174,384 | - | HP15_1140 | 0.88 | -0.0 | |
1,174,464 | - | -0.9 | |||
1,174,484 | + | +0.7 | |||
1,174,501 | + | -1.4 | |||
1,174,667 | + | -1.0 | |||
1,174,839 | + | -0.5 | |||
1,174,910 | + | -0.7 | |||
1,175,120 | + | HP15_1141 | 0.12 | +0.4 | |
1,175,248 | - | HP15_1141 | 0.28 | -0.8 | |
1,175,265 | - | HP15_1141 | 0.30 | -0.4 | |
1,175,287 | - | HP15_1141 | 0.33 | +0.7 | |
1,175,304 | - | HP15_1141 | 0.35 | +0.0 | |
1,175,319 | + | HP15_1141 | 0.37 | +0.6 | |
1,175,333 | - | HP15_1141 | 0.39 | +1.1 | |
1,175,555 | + | HP15_1141 | 0.68 | +0.2 | |
1,175,622 | + | HP15_1141 | 0.76 | +0.4 | |
1,175,663 | - | HP15_1141 | 0.82 | -0.4 | |
1,175,711 | - | HP15_1141 | 0.88 | +0.3 | |
1,175,788 | + | +0.0 |
Or see this region's nucleotide sequence