Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11200

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
1,156,208	+				+0.1
1,156,230	+				-1.0
1,156,447	+		PGA1_c11180	0.38	-1.3
1,156,544	+		PGA1_c11180	0.53	-1.7
1,156,590	-		PGA1_c11180	0.60	-1.7
1,156,834	+				+0.6
1,156,929	-				-0.2
1,156,929	-				-1.5
1,156,988	-		PGA1_c11190	0.13	+0.2
1,156,990	-		PGA1_c11190	0.14	+0.7
1,156,999	+		PGA1_c11190	0.18	-0.8
1,157,037	+		PGA1_c11190	0.36	+0.2
1,157,037	+		PGA1_c11190	0.36	+1.0
1,157,236	+				-1.3
1,157,319	-		PGA1_c11200	0.11	-1.1
1,157,496	+		PGA1_c11200	0.27	-1.8
1,157,550	+		PGA1_c11200	0.32	-0.1
1,157,558	-		PGA1_c11200	0.33	-2.3
1,157,566	-		PGA1_c11200	0.33	-2.8
1,157,581	-		PGA1_c11200	0.35	-0.7
1,157,586	-		PGA1_c11200	0.35	-2.6
1,157,622	+		PGA1_c11200	0.38	+0.1
1,157,630	-		PGA1_c11200	0.39	-2.0
1,157,697	-		PGA1_c11200	0.45	-2.3
1,157,701	-		PGA1_c11200	0.45	-1.0
1,157,777	-		PGA1_c11200	0.52	-0.9
1,157,925	-		PGA1_c11200	0.66	-0.5
1,158,059	+		PGA1_c11200	0.78	-1.2
1,158,116	-		PGA1_c11200	0.83	-2.2
1,158,178	+		PGA1_c11200	0.88	-2.2
1,158,265	+				-1.1
1,158,269	+				-0.3
1,158,273	-				-0.5
1,158,277	-				-0.0
1,158,374	-				-0.4
1,158,573	-				+0.3
1,158,577	+				-1.2
1,158,585	-				+0.6
1,158,655	-				+0.6
1,158,775	-				+0.3
1,158,824	-				+0.1
1,158,831	+				+0.4
1,158,831	+				+0.2
1,158,831	+				+0.4
1,158,831	+				+0.1
1,158,841	+				+0.6
1,158,875	-				+0.1
1,158,956	+		PGA1_c11220	0.11	+0.7
1,158,956	+		PGA1_c11220	0.11	-0.0
1,158,969	-		PGA1_c11220	0.12	-0.4
1,158,969	-		PGA1_c11220	0.12	-0.5
1,159,005	+		PGA1_c11220	0.13	-0.5
1,159,005	+		PGA1_c11220	0.13	+0.0
1,159,013	-		PGA1_c11220	0.13	-0.6
1,159,013	-		PGA1_c11220	0.13	-0.3
1,159,013	-		PGA1_c11220	0.13	-0.6
1,159,223	+		PGA1_c11220	0.19	+0.4
1,159,223	+		PGA1_c11220	0.19	+0.3
1,159,231	-		PGA1_c11220	0.19	+0.4
1,159,259	-		PGA1_c11220	0.20	-0.1
1,159,280	-		PGA1_c11220	0.21	+0.0
1,159,301	+		PGA1_c11220	0.21	+0.0