Experiment: nitrite 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17320 and BWI76_RS17325 overlap by 1 nucleotides BWI76_RS17325 and BWI76_RS17330 overlap by 4 nucleotides BWI76_RS17330 and BWI76_RS17335 overlap by 4 nucleotides
BWI76_RS17320: BWI76_RS17320 - respiratory nitrate reductase subunit gamma, at 3,585,392 to 3,586,069
_RS17320
BWI76_RS17325: BWI76_RS17325 - nitrate reductase molybdenum cofactor assembly chaperone, at 3,586,069 to 3,586,779
_RS17325
BWI76_RS17330: BWI76_RS17330 - nitrate reductase subunit beta, at 3,586,776 to 3,588,311
_RS17330
BWI76_RS17335: BWI76_RS17335 - nitrate reductase subunit alpha, at 3,588,308 to 3,592,051
_RS17335
Position (kb)
3586
3587
3588
3589 Strain fitness (log2 ratio)
-1
0
1 at 3585.852 kb on + strand, within BWI76_RS17320 at 3585.976 kb on - strand, within BWI76_RS17320 at 3586.413 kb on + strand, within BWI76_RS17325 at 3586.423 kb on + strand, within BWI76_RS17325 at 3586.513 kb on - strand, within BWI76_RS17325 at 3586.573 kb on + strand, within BWI76_RS17325 at 3586.661 kb on - strand, within BWI76_RS17325 at 3587.002 kb on + strand, within BWI76_RS17330 at 3587.251 kb on + strand, within BWI76_RS17330 at 3587.444 kb on - strand, within BWI76_RS17330 at 3587.501 kb on + strand, within BWI76_RS17330 at 3588.428 kb on + strand at 3588.483 kb on - strand at 3588.523 kb on + strand at 3588.872 kb on - strand, within BWI76_RS17335 at 3589.007 kb on - strand, within BWI76_RS17335 at 3589.276 kb on - strand, within BWI76_RS17335 at 3589.288 kb on + strand, within BWI76_RS17335
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 40 mM remove 3,585,852 + BWI76_RS17320 0.68 +0.8 3,585,976 - BWI76_RS17320 0.86 +0.5 3,586,413 + BWI76_RS17325 0.48 +0.9 3,586,423 + BWI76_RS17325 0.50 +0.4 3,586,513 - BWI76_RS17325 0.62 +0.7 3,586,573 + BWI76_RS17325 0.71 +0.3 3,586,661 - BWI76_RS17325 0.83 +0.6 3,587,002 + BWI76_RS17330 0.15 +0.1 3,587,251 + BWI76_RS17330 0.31 +1.1 3,587,444 - BWI76_RS17330 0.43 +1.2 3,587,501 + BWI76_RS17330 0.47 +0.2 3,588,428 + +0.5 3,588,483 - +1.1 3,588,523 + +1.0 3,588,872 - BWI76_RS17335 0.15 +0.9 3,589,007 - BWI76_RS17335 0.19 +0.9 3,589,276 - BWI76_RS17335 0.26 +0.8 3,589,288 + BWI76_RS17335 0.26 +1.0
Or see this region's nucleotide sequence