Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0821 and DvMF_0822 are separated by 922 nucleotides DvMF_0822 and DvMF_0823 are separated by 268 nucleotides
DvMF_0821: DvMF_0821 - purine nucleoside phosphorylase (RefSeq), at 989,439 to 990,284
_0821
DvMF_0822: DvMF_0822 - GTP-binding protein TypA (RefSeq), at 991,207 to 993,045
_0822
DvMF_0823: DvMF_0823 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 993,314 to 994,684
_0823
Position (kb)
991
992
993
994 Strain fitness (log2 ratio)
-2
-1
0
1 at 990.279 kb on + strand at 990.279 kb on + strand at 990.291 kb on + strand at 990.299 kb on - strand at 990.321 kb on - strand at 990.582 kb on + strand at 990.592 kb on + strand at 990.609 kb on + strand at 990.826 kb on + strand at 990.874 kb on - strand at 991.159 kb on + strand at 991.232 kb on + strand at 991.368 kb on - strand at 991.488 kb on + strand, within DvMF_0822 at 991.579 kb on + strand, within DvMF_0822 at 991.925 kb on - strand, within DvMF_0822 at 992.626 kb on + strand, within DvMF_0822 at 992.734 kb on - strand, within DvMF_0822 at 992.779 kb on + strand, within DvMF_0822 at 992.787 kb on - strand, within DvMF_0822 at 992.987 kb on - strand at 993.068 kb on - strand at 993.081 kb on + strand at 993.304 kb on + strand at 993.900 kb on - strand, within DvMF_0823 at 993.983 kb on - strand, within DvMF_0823 at 993.983 kb on - strand, within DvMF_0823
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 990,279 + -1.2 990,279 + -2.1 990,291 + -0.6 990,299 - -0.5 990,321 - -0.3 990,582 + -0.6 990,592 + +0.0 990,609 + -0.0 990,826 + -0.5 990,874 - -0.3 991,159 + -0.0 991,232 + +0.2 991,368 - +0.3 991,488 + DvMF_0822 0.15 +0.2 991,579 + DvMF_0822 0.20 +0.2 991,925 - DvMF_0822 0.39 +0.6 992,626 + DvMF_0822 0.77 +0.2 992,734 - DvMF_0822 0.83 +0.3 992,779 + DvMF_0822 0.85 +0.1 992,787 - DvMF_0822 0.86 +0.5 992,987 - +0.1 993,068 - +0.6 993,081 + -0.5 993,304 + +0.7 993,900 - DvMF_0823 0.43 +0.1 993,983 - DvMF_0823 0.49 -0.3 993,983 - DvMF_0823 0.49 -0.3
Or see this region's nucleotide sequence