Strain Fitness in Pantoea sp. MT58 around IAI47_21695

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
80,134	+				+0.6
80,134	+				-0.8
80,134	+				-0.7
80,134	+				+0.7
80,135	-				-0.7
80,135	-				-2.4
80,135	-				+0.1
80,146	+				+0.9
80,147	-				-0.0
80,147	-				-0.8
80,147	-				+0.1
80,147	-				+0.2
80,183	+				+0.0
80,183	+				-0.4
80,184	-				+0.4
80,221	-				+1.3
80,223	+				-0.0
80,223	+				+0.7
80,254	+				-1.1
80,254	+				-0.3
80,255	-				-0.2
80,270	-				-1.8
80,287	+				-0.6
80,288	-				-0.0
80,370	+		IAI47_21690	0.16	+1.0
80,370	+		IAI47_21690	0.16	+1.1
80,370	+		IAI47_21690	0.16	+1.6
80,370	+		IAI47_21690	0.16	-0.2
80,370	+		IAI47_21690	0.16	-0.4
80,370	+		IAI47_21690	0.16	-0.9
80,371	-		IAI47_21690	0.16	+0.1
80,371	-		IAI47_21690	0.16	+0.3
80,377	-		IAI47_21690	0.17	-1.1
80,411	+		IAI47_21690	0.22	+0.4
80,411	+		IAI47_21690	0.22	-1.1
80,411	+		IAI47_21690	0.22	-0.4
80,412	-		IAI47_21690	0.22	-0.8
80,412	-		IAI47_21690	0.22	-0.7
80,412	-		IAI47_21690	0.22	-0.9
80,412	-		IAI47_21690	0.22	-1.6
80,412	-		IAI47_21690	0.22	-1.0
80,431	-		IAI47_21690	0.26	-0.5
80,431	-		IAI47_21690	0.26	+0.0
80,432	+		IAI47_21690	0.26	-0.4
80,432	+		IAI47_21690	0.26	+0.5
80,432	+		IAI47_21690	0.26	-1.7
80,432	+		IAI47_21690	0.26	-0.0
80,432	+		IAI47_21690	0.26	-1.2
80,432	+		IAI47_21690	0.26	-1.4
80,433	-		IAI47_21690	0.26	-1.7
80,433	-		IAI47_21690	0.26	-0.8
80,433	-		IAI47_21690	0.26	+1.1
80,433	-		IAI47_21690	0.26	-0.2
80,436	+		IAI47_21690	0.26	+0.6
80,437	-		IAI47_21690	0.27	-1.6
80,438	+		IAI47_21690	0.27	-0.4
80,439	-		IAI47_21690	0.27	+0.0
80,439	-		IAI47_21690	0.27	+0.3
80,473	+		IAI47_21690	0.32	-0.4
80,473	+		IAI47_21690	0.32	-0.7
80,473	+		IAI47_21690	0.32	+1.2
80,473	+		IAI47_21690	0.32	+3.5
80,473	+		IAI47_21690	0.32	-0.9
80,474	-		IAI47_21690	0.33	-0.8
80,474	-		IAI47_21690	0.33	-0.6
80,474	-		IAI47_21690	0.33	+1.6
80,476	+		IAI47_21690	0.33	+1.5
80,476	+		IAI47_21690	0.33	+0.4
80,476	+		IAI47_21690	0.33	-1.9
80,476	+		IAI47_21690	0.33	+1.3
80,476	+		IAI47_21690	0.33	+0.5
80,476	+		IAI47_21690	0.33	+0.7
80,476	+		IAI47_21690	0.33	+2.4
80,476	+		IAI47_21690	0.33	+0.4
80,477	-		IAI47_21690	0.33	-0.8
80,477	-		IAI47_21690	0.33	+0.6
80,477	-		IAI47_21690	0.33	-0.3
80,477	-		IAI47_21690	0.33	-0.1
80,477	-		IAI47_21690	0.33	-0.4
80,501	+		IAI47_21690	0.37	-1.1
80,502	-		IAI47_21690	0.37	-0.0
80,502	-		IAI47_21690	0.37	-0.7
80,502	-		IAI47_21690	0.37	-1.0
80,531	+		IAI47_21690	0.42	-1.6
80,531	+		IAI47_21690	0.42	+1.2
80,531	+		IAI47_21690	0.42	+0.4
80,532	-		IAI47_21690	0.42	+1.7
80,532	-		IAI47_21690	0.42	-2.4
80,532	-		IAI47_21690	0.42	-0.8
80,532	-		IAI47_21690	0.42	-1.4
80,532	-		IAI47_21690	0.42	-0.9
80,532	-		IAI47_21690	0.42	-1.3
80,619	+		IAI47_21690	0.56	+0.8
80,620	-		IAI47_21690	0.56	+0.5
80,620	-		IAI47_21690	0.56	+0.2
80,624	+		IAI47_21690	0.57	-0.0
80,624	+		IAI47_21690	0.57	+0.6
80,624	+		IAI47_21690	0.57	+0.8
80,625	-		IAI47_21690	0.57	-0.2
80,687	+		IAI47_21690	0.67	-1.1
80,687	+		IAI47_21690	0.67	+0.6
80,687	+		IAI47_21690	0.67	+0.1
80,688	-		IAI47_21690	0.67	+0.6
80,705	-		IAI47_21690	0.70	-0.4
80,705	-		IAI47_21690	0.70	-1.4
80,775	+		IAI47_21690	0.81	-0.4
80,786	+		IAI47_21690	0.83	+0.4
80,793	+		IAI47_21690	0.84	+0.8
80,793	+		IAI47_21690	0.84	+0.3
80,794	-		IAI47_21690	0.85	-0.2
80,794	-		IAI47_21690	0.85	-0.4
80,794	-		IAI47_21690	0.85	+0.8
80,794	-		IAI47_21690	0.85	-0.2
80,806	+		IAI47_21690	0.87	-0.5
80,807	-		IAI47_21690	0.87	-0.9
80,817	+		IAI47_21690	0.88	-0.6
80,817	+		IAI47_21690	0.88	-0.9
80,818	-		IAI47_21690	0.88	-0.1
80,818	-		IAI47_21690	0.88	-0.2
80,818	-		IAI47_21690	0.88	-1.2
80,867	-				-0.6
80,867	-				+1.6
80,867	-				-0.3
80,869	+				+1.1
80,870	-				-0.9
80,870	-				-0.8
80,936	+				-0.2
80,936	+				-1.4
80,937	-				-0.2
80,975	+				-0.1
80,975	+				-0.8
80,975	+				+1.6
80,975	+				-0.4
80,976	-				+0.5
80,984	+				+1.1
80,984	+				-1.6
80,984	+				-0.4
81,028	+				-0.3
81,029	-				+1.1
81,029	-				-1.3
81,029	-				+0.3
81,029	-				-0.2
81,029	-				-0.6
81,048	+				+0.2
81,048	+				-0.0
81,048	+				-0.6
81,049	-				+0.5
81,049	-				+0.6
81,049	-				-1.5
81,049	-				+1.3
81,111	+				+0.9
81,112	-				-0.2
81,112	-				-1.5
81,112	-				+0.4
81,187	+				+0.8
81,187	+				+1.8
81,187	+				-0.1
81,187	+				-0.2
81,188	-				+0.7
81,188	-				-2.3
81,201	-				-1.4
81,286	+		IAI47_21695	0.12	+0.7
81,287	-		IAI47_21695	0.13	+0.8
81,287	-		IAI47_21695	0.13	+0.6
81,287	-		IAI47_21695	0.13	+0.3
81,287	-		IAI47_21695	0.13	-0.6
81,331	-		IAI47_21695	0.16	+1.1
81,476	+		IAI47_21695	0.27	+1.3
81,476	+		IAI47_21695	0.27	+0.2
81,477	-		IAI47_21695	0.27	+0.6
81,477	-		IAI47_21695	0.27	+3.3
81,477	-		IAI47_21695	0.27	+0.3
81,477	-		IAI47_21695	0.27	-1.4
81,587	+		IAI47_21695	0.36	-0.4
81,588	-		IAI47_21695	0.36	+0.3
81,588	-		IAI47_21695	0.36	+0.2
81,588	-		IAI47_21695	0.36	+0.8
81,588	-		IAI47_21695	0.36	+1.3
81,608	+		IAI47_21695	0.38	-0.1
81,608	+		IAI47_21695	0.38	+1.9
81,609	-		IAI47_21695	0.38	-0.3
81,609	-		IAI47_21695	0.38	-0.1
81,609	-		IAI47_21695	0.38	-1.4
81,611	+		IAI47_21695	0.38	+0.6
81,612	-		IAI47_21695	0.38	+0.7
81,612	-		IAI47_21695	0.38	+1.1
81,616	-		IAI47_21695	0.38	+0.8
81,616	-		IAI47_21695	0.38	-0.3
81,616	-		IAI47_21695	0.38	+0.8
81,616	-		IAI47_21695	0.38	+0.8
81,624	-		IAI47_21695	0.39	+1.1
81,675	-		IAI47_21695	0.43	+0.7
81,694	+		IAI47_21695	0.44	+1.6
81,758	-		IAI47_21695	0.49	-1.1
81,790	+		IAI47_21695	0.52	+2.1
81,790	+		IAI47_21695	0.52	+0.3
81,791	-		IAI47_21695	0.52	-1.7
81,791	-		IAI47_21695	0.52	+1.6
81,801	+		IAI47_21695	0.53	-0.1
81,802	-		IAI47_21695	0.53	+0.6
81,942	-		IAI47_21695	0.64	+0.3
81,969	+		IAI47_21695	0.66	+0.1
81,969	+		IAI47_21695	0.66	+0.6
81,969	+		IAI47_21695	0.66	+0.0
81,969	+		IAI47_21695	0.66	-1.0
81,969	+		IAI47_21695	0.66	+0.3
81,970	-		IAI47_21695	0.66	+0.2
81,970	-		IAI47_21695	0.66	+1.6
81,978	-		IAI47_21695	0.66	+0.4
82,043	+		IAI47_21695	0.71	-0.7
82,043	+		IAI47_21695	0.71	+0.6
82,043	+		IAI47_21695	0.71	+2.8
82,044	+		IAI47_21695	0.71	+0.3
82,044	-		IAI47_21695	0.71	+0.8
82,122	-		IAI47_21695	0.78	+1.4
82,132	+		IAI47_21695	0.78	+0.9
82,132	+		IAI47_21695	0.78	+5.7
82,132	+		IAI47_21695	0.78	+1.6
82,133	-		IAI47_21695	0.78	+1.7
82,133	-		IAI47_21695	0.78	+0.1
82,142	+		IAI47_21695	0.79	-0.2
82,143	-		IAI47_21695	0.79	+1.3
82,143	-		IAI47_21695	0.79	-0.1
82,219	+		IAI47_21695	0.85	-1.2
82,220	-		IAI47_21695	0.85	+1.0
82,250	+		IAI47_21695	0.88	-1.6
82,250	+		IAI47_21695	0.88	-0.0
82,341	+				+0.7
82,341	+				-0.2
82,341	+				-1.5
82,341	+				+2.1
82,341	+				-0.1
82,341	+				+1.6
82,341	+				-0.6
82,341	+				+0.7
82,341	+				+1.1
82,342	-				+1.3
82,342	-				+2.4
82,342	-				+0.2
82,342	-				-0.4
82,342	-				-0.7
82,342	-				+0.0
82,342	-				+2.9
82,342	-				-0.9
82,342	-				+3.6
82,342	-				+3.9
82,397	+				+0.5
82,397	+				+0.7
82,397	+				-0.6
82,397	+				-0.0
82,397	+				-1.0
82,397	+				+1.0
82,463	+				+0.5
82,463	+				+0.4
82,463	+				+0.3
82,464	-				+0.6
82,464	-				-0.1
82,464	-				+1.1
82,519	+				+0.7
82,519	+				+0.4
82,520	-				+0.7
82,520	-				+1.6
82,527	+				-2.0
82,527	+				+0.4
82,527	+				-0.7
82,527	+				+0.7
82,527	+				+1.7
82,528	-				+0.8
82,535	+				-0.1
82,616	+		IAI47_21700	0.36	+0.9
82,617	-		IAI47_21700	0.36	-0.2
82,617	-		IAI47_21700	0.36	-0.8
82,649	+		IAI47_21700	0.50	-1.7
82,649	+		IAI47_21700	0.50	+0.6
82,649	+		IAI47_21700	0.50	-1.8
82,650	-		IAI47_21700	0.51	-0.8
82,650	-		IAI47_21700	0.51	+0.0
82,661	+		IAI47_21700	0.56	-1.0
82,661	+		IAI47_21700	0.56	+0.8
82,662	-		IAI47_21700	0.56	+1.5
82,662	-		IAI47_21700	0.56	+0.6
82,662	-		IAI47_21700	0.56	-1.0
82,662	-		IAI47_21700	0.56	+1.7
82,662	-		IAI47_21700	0.56	+0.0
82,664	+		IAI47_21700	0.57	-0.2
82,664	+		IAI47_21700	0.57	-0.1
82,664	+		IAI47_21700	0.57	-1.1
82,664	+		IAI47_21700	0.57	+0.1
82,664	+		IAI47_21700	0.57	-1.8
82,664	+		IAI47_21700	0.57	+1.5
82,665	-		IAI47_21700	0.57	+0.1
82,682	+		IAI47_21700	0.65	-0.6
82,682	+		IAI47_21700	0.65	-1.7
82,682	+		IAI47_21700	0.65	-1.9
82,683	-		IAI47_21700	0.65	-0.8
82,683	-		IAI47_21700	0.65	-1.7
82,683	-		IAI47_21700	0.65	+0.3
82,768	+				-0.0
82,768	+				-1.4
82,769	-				+1.9
82,769	-				-0.3
82,769	-				-0.6
82,797	+				+1.8
82,798	-				-1.1
82,798	-				-0.0
82,865	+				+0.1
82,866	-				+1.9
82,866	-				+0.6
82,877	+				+0.7
82,877	+				+0.6
82,878	-				+0.8
82,878	-				+1.6
82,952	+				-1.1
82,952	+				+0.9
82,952	+				-0.4
82,952	+				-2.5
82,953	-				+1.5
82,954	+				-0.0
82,954	+				+2.1
82,954	+				-1.8
82,955	-				+4.3
82,955	-				-2.8
82,955	-				+0.2
83,007	-				+0.8
83,035	+		IAI47_21705	0.12	+0.1
83,035	+		IAI47_21705	0.12	-2.0
83,036	-		IAI47_21705	0.12	+0.1
83,036	-		IAI47_21705	0.12	-0.3
83,107	+		IAI47_21705	0.21	+0.4
83,108	-		IAI47_21705	0.21	-0.9
83,128	+		IAI47_21705	0.23	-0.6
83,128	+		IAI47_21705	0.23	-1.9
83,128	+		IAI47_21705	0.23	+1.3
83,165	+		IAI47_21705	0.28	+4.1
83,166	-		IAI47_21705	0.28	+0.9
83,173	+		IAI47_21705	0.29	+1.6
83,174	-		IAI47_21705	0.29	-0.7
83,174	-		IAI47_21705	0.29	-0.3
83,188	+		IAI47_21705	0.31	-1.7
83,188	+		IAI47_21705	0.31	-2.6
83,189	-		IAI47_21705	0.31	+0.1
83,189	-		IAI47_21705	0.31	-0.9
83,189	-		IAI47_21705	0.31	+2.0
83,189	-		IAI47_21705	0.31	+0.8
83,189	-		IAI47_21705	0.31	+2.2
83,231	+		IAI47_21705	0.36	+0.7
83,231	+		IAI47_21705	0.36	+0.4
83,299	-		IAI47_21705	0.45	-0.9
83,299	-		IAI47_21705	0.45	+2.0
83,299	-		IAI47_21705	0.45	-0.4
83,299	-		IAI47_21705	0.45	-0.2