Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05970

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05969 and H281DRAFT_05970 are separated by 412 nucleotidesH281DRAFT_05970 and H281DRAFT_05971 are separated by 114 nucleotides H281DRAFT_05969: H281DRAFT_05969 - Uncharacterized proteins of the AP superfamily, at 110,851 to 112,539 _05969 H281DRAFT_05970: H281DRAFT_05970 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 112,952 to 113,554 _05970 H281DRAFT_05971: H281DRAFT_05971 - Uncharacterized membrane protein YoaK, UPF0700 family, at 113,669 to 114,481 _05971 Position (kb) 112 113 114Strain fitness (log2 ratio) -1 0 1at 111.974 kb on + strand, within H281DRAFT_05969at 111.975 kb on - strand, within H281DRAFT_05969at 112.638 kb on - strandat 113.034 kb on + strand, within H281DRAFT_05970at 113.507 kb on - strandat 113.887 kb on - strand, within H281DRAFT_05971at 114.400 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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111,974 + H281DRAFT_05969 0.66 +0.6
111,975 - H281DRAFT_05969 0.67 +0.1
112,638 - -0.8
113,034 + H281DRAFT_05970 0.14 +0.5
113,507 - -0.8
113,887 - H281DRAFT_05971 0.27 +0.8
114,400 - -1.1

Or see this region's nucleotide sequence