Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05215 and H281DRAFT_05216 are separated by 100 nucleotides H281DRAFT_05216 and H281DRAFT_05217 are separated by 5 nucleotides H281DRAFT_05217 and H281DRAFT_05218 are separated by 190 nucleotides
H281DRAFT_05215: H281DRAFT_05215 - Uncharacterized membrane protein YhfC, at 178,065 to 178,934
_05215
H281DRAFT_05216: H281DRAFT_05216 - Protein of unknown function (DUF3022), at 179,035 to 179,400
_05216
H281DRAFT_05217: H281DRAFT_05217 - PGDYG protein, at 179,406 to 179,849
_05217
H281DRAFT_05218: H281DRAFT_05218 - LTXXQ motif family protein, at 180,040 to 180,558
_05218
Position (kb) 179
180 Strain fitness (log2 ratio) -1
0
1 at 178.246 kb on - strand, within H281DRAFT_05215 at 178.476 kb on + strand, within H281DRAFT_05215 at 178.477 kb on - strand, within H281DRAFT_05215 at 178.582 kb on - strand, within H281DRAFT_05215 at 178.867 kb on + strand at 178.989 kb on - strand at 179.092 kb on - strand, within H281DRAFT_05216 at 179.125 kb on - strand, within H281DRAFT_05216 at 179.302 kb on + strand, within H281DRAFT_05216 at 179.339 kb on - strand, within H281DRAFT_05216 at 179.423 kb on - strand at 179.612 kb on + strand, within H281DRAFT_05217 at 179.612 kb on + strand, within H281DRAFT_05217 at 179.613 kb on - strand, within H281DRAFT_05217 at 179.641 kb on + strand, within H281DRAFT_05217 at 179.642 kb on - strand, within H281DRAFT_05217 at 179.720 kb on - strand, within H281DRAFT_05217 at 180.041 kb on + strand at 180.042 kb on - strand at 180.094 kb on - strand, within H281DRAFT_05218 at 180.146 kb on - strand, within H281DRAFT_05218 at 180.185 kb on + strand, within H281DRAFT_05218
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 178,246 - H281DRAFT_05215 0.21 -0.0 178,476 + H281DRAFT_05215 0.47 -0.1 178,477 - H281DRAFT_05215 0.47 +0.3 178,582 - H281DRAFT_05215 0.59 -0.1 178,867 + +0.6 178,989 - -0.0 179,092 - H281DRAFT_05216 0.16 +0.8 179,125 - H281DRAFT_05216 0.25 +0.3 179,302 + H281DRAFT_05216 0.73 +1.1 179,339 - H281DRAFT_05216 0.83 +0.7 179,423 - +0.2 179,612 + H281DRAFT_05217 0.46 +0.3 179,612 + H281DRAFT_05217 0.46 +0.3 179,613 - H281DRAFT_05217 0.47 +0.7 179,641 + H281DRAFT_05217 0.53 +0.2 179,642 - H281DRAFT_05217 0.53 -0.2 179,720 - H281DRAFT_05217 0.71 +0.1 180,041 + +0.1 180,042 - +0.9 180,094 - H281DRAFT_05218 0.10 +0.0 180,146 - H281DRAFT_05218 0.20 +0.3 180,185 + H281DRAFT_05218 0.28 +0.1
Or see this region's nucleotide sequence