Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05181 and H281DRAFT_05182 overlap by 4 nucleotides H281DRAFT_05182 and H281DRAFT_05183 overlap by 1 nucleotides H281DRAFT_05183 and H281DRAFT_05184 are separated by 571 nucleotides
H281DRAFT_05181: H281DRAFT_05181 - putrescine transport system ATP-binding protein, at 136,987 to 138,153
_05181
H281DRAFT_05182: H281DRAFT_05182 - putrescine transport system permease protein, at 138,150 to 139,079
_05182
H281DRAFT_05183: H281DRAFT_05183 - putrescine transport system permease protein, at 139,079 to 139,894
_05183
H281DRAFT_05184: H281DRAFT_05184 - methyl-accepting chemotaxis sensory transducer, at 140,466 to 141,869
_05184
Position (kb) 139
140 Strain fitness (log2 ratio) -1
0
1 at 138.109 kb on + strand at 138.110 kb on - strand at 138.110 kb on - strand at 138.272 kb on - strand, within H281DRAFT_05182 at 138.408 kb on + strand at 138.409 kb on - strand, within H281DRAFT_05182 at 138.420 kb on + strand, within H281DRAFT_05182 at 138.420 kb on + strand, within H281DRAFT_05182 at 138.421 kb on - strand, within H281DRAFT_05182 at 138.421 kb on - strand, within H281DRAFT_05182 at 138.421 kb on - strand, within H281DRAFT_05182 at 138.489 kb on + strand, within H281DRAFT_05182 at 138.490 kb on - strand, within H281DRAFT_05182 at 138.492 kb on + strand, within H281DRAFT_05182 at 138.493 kb on - strand, within H281DRAFT_05182 at 138.666 kb on + strand, within H281DRAFT_05182 at 138.667 kb on - strand, within H281DRAFT_05182 at 138.667 kb on - strand, within H281DRAFT_05182 at 138.702 kb on + strand, within H281DRAFT_05182 at 138.702 kb on + strand, within H281DRAFT_05182 at 138.703 kb on - strand, within H281DRAFT_05182 at 138.735 kb on + strand, within H281DRAFT_05182 at 138.781 kb on - strand, within H281DRAFT_05182 at 138.821 kb on + strand, within H281DRAFT_05182 at 138.821 kb on + strand, within H281DRAFT_05182 at 138.822 kb on - strand, within H281DRAFT_05182 at 138.873 kb on - strand, within H281DRAFT_05182 at 138.924 kb on - strand, within H281DRAFT_05182 at 138.924 kb on - strand, within H281DRAFT_05182 at 139.010 kb on - strand at 139.194 kb on + strand, within H281DRAFT_05183 at 139.373 kb on - strand, within H281DRAFT_05183 at 139.846 kb on + strand at 139.851 kb on - strand at 139.900 kb on + strand at 139.938 kb on + strand at 140.075 kb on - strand at 140.078 kb on - strand at 140.084 kb on + strand at 140.085 kb on - strand at 140.097 kb on + strand at 140.098 kb on - strand at 140.115 kb on + strand at 140.118 kb on - strand at 140.302 kb on + strand at 140.354 kb on + strand at 140.468 kb on - strand at 140.474 kb on + strand at 140.475 kb on - strand at 140.475 kb on - strand at 140.475 kb on - strand at 140.475 kb on - strand at 140.541 kb on + strand at 140.542 kb on - strand at 140.575 kb on + strand at 140.600 kb on + strand at 140.866 kb on + strand, within H281DRAFT_05184 at 140.866 kb on + strand, within H281DRAFT_05184 at 140.867 kb on - strand, within H281DRAFT_05184 at 140.867 kb on - strand, within H281DRAFT_05184
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 138,109 + +0.2 138,110 - +1.1 138,110 - +0.9 138,272 - H281DRAFT_05182 0.13 -1.7 138,408 + +1.0 138,409 - H281DRAFT_05182 0.28 -0.1 138,420 + H281DRAFT_05182 0.29 +0.5 138,420 + H281DRAFT_05182 0.29 +0.2 138,421 - H281DRAFT_05182 0.29 +0.3 138,421 - H281DRAFT_05182 0.29 -0.7 138,421 - H281DRAFT_05182 0.29 +0.0 138,489 + H281DRAFT_05182 0.36 -0.0 138,490 - H281DRAFT_05182 0.37 -0.0 138,492 + H281DRAFT_05182 0.37 +0.5 138,493 - H281DRAFT_05182 0.37 +0.4 138,666 + H281DRAFT_05182 0.55 +0.0 138,667 - H281DRAFT_05182 0.56 +0.7 138,667 - H281DRAFT_05182 0.56 +0.8 138,702 + H281DRAFT_05182 0.59 +0.3 138,702 + H281DRAFT_05182 0.59 -0.2 138,703 - H281DRAFT_05182 0.59 +0.0 138,735 + H281DRAFT_05182 0.63 +0.1 138,781 - H281DRAFT_05182 0.68 +0.2 138,821 + H281DRAFT_05182 0.72 -0.1 138,821 + H281DRAFT_05182 0.72 -0.3 138,822 - H281DRAFT_05182 0.72 +0.5 138,873 - H281DRAFT_05182 0.78 +0.9 138,924 - H281DRAFT_05182 0.83 +0.5 138,924 - H281DRAFT_05182 0.83 -0.0 139,010 - -0.8 139,194 + H281DRAFT_05183 0.14 +0.8 139,373 - H281DRAFT_05183 0.36 +0.5 139,846 + +0.6 139,851 - -0.2 139,900 + +0.1 139,938 + -0.3 140,075 - +0.8 140,078 - -0.5 140,084 + +0.3 140,085 - +0.9 140,097 + -0.9 140,098 - +0.3 140,115 + +0.0 140,118 - +0.7 140,302 + +0.0 140,354 + +0.2 140,468 - +0.7 140,474 + +0.9 140,475 - +0.6 140,475 - +0.2 140,475 - +1.2 140,475 - -0.0 140,541 + -0.5 140,542 - -0.5 140,575 + +0.3 140,600 + +0.9 140,866 + H281DRAFT_05184 0.28 +0.5 140,866 + H281DRAFT_05184 0.28 +0.0 140,867 - H281DRAFT_05184 0.29 +0.0 140,867 - H281DRAFT_05184 0.29 -0.8
Or see this region's nucleotide sequence