Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04560 and H281DRAFT_04561 are separated by 206 nucleotides H281DRAFT_04561 and H281DRAFT_04562 are separated by 356 nucleotides H281DRAFT_04562 and H281DRAFT_04563 are separated by 234 nucleotides
H281DRAFT_04560: H281DRAFT_04560 - amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-), at 293,042 to 294,358
_04560
H281DRAFT_04561: H281DRAFT_04561 - SSU ribosomal protein S15P, at 294,565 to 294,837
_04561
H281DRAFT_04562: H281DRAFT_04562 - polyribonucleotide nucleotidyltransferase, at 295,194 to 297,341
_04562
H281DRAFT_04563: H281DRAFT_04563 - NADPH2:quinone reductase, at 297,576 to 298,592
_04563
Position (kb) 295
296
297
298 Strain fitness (log2 ratio) -1
0
1
2 at 294.218 kb on + strand at 294.219 kb on - strand, within H281DRAFT_04560 at 294.219 kb on - strand, within H281DRAFT_04560 at 294.440 kb on + strand at 294.440 kb on + strand at 294.931 kb on + strand at 297.087 kb on + strand, within H281DRAFT_04562 at 297.726 kb on + strand, within H281DRAFT_04563 at 297.841 kb on + strand, within H281DRAFT_04563 at 297.841 kb on + strand, within H281DRAFT_04563 at 297.841 kb on + strand, within H281DRAFT_04563 at 297.841 kb on + strand, within H281DRAFT_04563 at 297.842 kb on - strand, within H281DRAFT_04563 at 297.842 kb on - strand, within H281DRAFT_04563 at 297.853 kb on + strand, within H281DRAFT_04563 at 297.854 kb on - strand, within H281DRAFT_04563 at 297.876 kb on + strand, within H281DRAFT_04563 at 297.877 kb on - strand, within H281DRAFT_04563 at 297.877 kb on - strand, within H281DRAFT_04563 at 298.173 kb on + strand, within H281DRAFT_04563 at 298.173 kb on + strand, within H281DRAFT_04563 at 298.174 kb on - strand, within H281DRAFT_04563 at 298.260 kb on + strand, within H281DRAFT_04563 at 298.261 kb on - strand, within H281DRAFT_04563 at 298.261 kb on - strand, within H281DRAFT_04563 at 298.277 kb on + strand, within H281DRAFT_04563 at 298.310 kb on - strand, within H281DRAFT_04563
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 294,218 + +1.0 294,219 - H281DRAFT_04560 0.89 +0.2 294,219 - H281DRAFT_04560 0.89 +0.4 294,440 + +0.1 294,440 + +2.3 294,931 + +0.3 297,087 + H281DRAFT_04562 0.88 +0.7 297,726 + H281DRAFT_04563 0.15 +1.7 297,841 + H281DRAFT_04563 0.26 -0.1 297,841 + H281DRAFT_04563 0.26 +0.7 297,841 + H281DRAFT_04563 0.26 +0.8 297,841 + H281DRAFT_04563 0.26 +0.1 297,842 - H281DRAFT_04563 0.26 +0.5 297,842 - H281DRAFT_04563 0.26 +0.5 297,853 + H281DRAFT_04563 0.27 -0.1 297,854 - H281DRAFT_04563 0.27 +0.7 297,876 + H281DRAFT_04563 0.29 -0.6 297,877 - H281DRAFT_04563 0.30 -0.6 297,877 - H281DRAFT_04563 0.30 +0.4 298,173 + H281DRAFT_04563 0.59 +0.2 298,173 + H281DRAFT_04563 0.59 +0.2 298,174 - H281DRAFT_04563 0.59 +0.0 298,260 + H281DRAFT_04563 0.67 +0.3 298,261 - H281DRAFT_04563 0.67 +0.2 298,261 - H281DRAFT_04563 0.67 +0.2 298,277 + H281DRAFT_04563 0.69 -0.3 298,310 - H281DRAFT_04563 0.72 +0.4
Or see this region's nucleotide sequence