Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03960 and H281DRAFT_03961 are separated by 410 nucleotides H281DRAFT_03961 and H281DRAFT_03962 overlap by 1 nucleotides
H281DRAFT_03960: H281DRAFT_03960 - disulfide bond formation protein DsbB, at 63,708 to 64,217
_03960
H281DRAFT_03961: H281DRAFT_03961 - xanthine dehydrogenase, small subunit (EC 1.17.1.4) <small>(from data)</small>, at 64,628 to 66,256
_03961
H281DRAFT_03962: H281DRAFT_03962 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 66,256 to 68,706
_03962
Position (kb) 64
65
66
67 Strain fitness (log2 ratio) -2
-1
0
1 at 63.637 kb on + strand at 63.687 kb on + strand at 63.688 kb on - strand at 64.233 kb on + strand at 64.251 kb on + strand at 64.251 kb on + strand at 64.306 kb on + strand at 64.307 kb on - strand at 64.592 kb on - strand at 64.607 kb on + strand at 64.613 kb on + strand at 64.637 kb on + strand at 64.638 kb on - strand at 65.477 kb on + strand, within H281DRAFT_03961 at 65.477 kb on + strand, within H281DRAFT_03961 at 65.478 kb on - strand, within H281DRAFT_03961 at 65.478 kb on - strand, within H281DRAFT_03961 at 65.478 kb on - strand, within H281DRAFT_03961 at 65.565 kb on - strand, within H281DRAFT_03961 at 65.771 kb on + strand, within H281DRAFT_03961 at 65.864 kb on + strand, within H281DRAFT_03961 at 65.864 kb on + strand, within H281DRAFT_03961 at 65.865 kb on - strand, within H281DRAFT_03961 at 65.865 kb on - strand, within H281DRAFT_03961 at 65.882 kb on + strand, within H281DRAFT_03961 at 66.081 kb on - strand, within H281DRAFT_03961 at 66.407 kb on - strand at 66.619 kb on + strand, within H281DRAFT_03962 at 66.620 kb on - strand, within H281DRAFT_03962 at 66.978 kb on + strand, within H281DRAFT_03962 at 66.978 kb on + strand, within H281DRAFT_03962 at 66.978 kb on + strand, within H281DRAFT_03962 at 66.979 kb on - strand, within H281DRAFT_03962 at 66.979 kb on - strand, within H281DRAFT_03962 at 66.999 kb on + strand, within H281DRAFT_03962 at 67.175 kb on - strand, within H281DRAFT_03962 at 67.227 kb on - strand, within H281DRAFT_03962
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 63,637 + +0.4 63,687 + +0.4 63,688 - -0.9 64,233 + +0.7 64,251 + +0.3 64,251 + -0.0 64,306 + +0.4 64,307 - +0.7 64,592 - +0.1 64,607 + +0.5 64,613 + -1.8 64,637 + +0.1 64,638 - +0.5 65,477 + H281DRAFT_03961 0.52 +0.7 65,477 + H281DRAFT_03961 0.52 -0.1 65,478 - H281DRAFT_03961 0.52 +1.6 65,478 - H281DRAFT_03961 0.52 +0.4 65,478 - H281DRAFT_03961 0.52 -0.6 65,565 - H281DRAFT_03961 0.58 +0.3 65,771 + H281DRAFT_03961 0.70 -0.3 65,864 + H281DRAFT_03961 0.76 -1.6 65,864 + H281DRAFT_03961 0.76 +0.1 65,865 - H281DRAFT_03961 0.76 -0.3 65,865 - H281DRAFT_03961 0.76 +0.6 65,882 + H281DRAFT_03961 0.77 +0.6 66,081 - H281DRAFT_03961 0.89 +0.8 66,407 - +0.2 66,619 + H281DRAFT_03962 0.15 +0.2 66,620 - H281DRAFT_03962 0.15 +0.4 66,978 + H281DRAFT_03962 0.29 -0.2 66,978 + H281DRAFT_03962 0.29 -0.4 66,978 + H281DRAFT_03962 0.29 +0.6 66,979 - H281DRAFT_03962 0.29 +0.8 66,979 - H281DRAFT_03962 0.29 -0.4 66,999 + H281DRAFT_03962 0.30 +0.1 67,175 - H281DRAFT_03962 0.37 +0.8 67,227 - H281DRAFT_03962 0.40 +1.3
Or see this region's nucleotide sequence