Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03497 and H281DRAFT_03498 are separated by 6 nucleotides H281DRAFT_03498 and H281DRAFT_03499 are separated by 262 nucleotides
H281DRAFT_03497: H281DRAFT_03497 - transcriptional regulator, DeoR family, at 582,009 to 582,764
_03497
H281DRAFT_03498: H281DRAFT_03498 - hypothetical protein, at 582,771 to 583,052
_03498
H281DRAFT_03499: H281DRAFT_03499 - 2-aminoethylphosphonate transport system substrate-binding protein, at 583,315 to 584,403
_03499
Position (kb) 582
583
584 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 581.792 kb on - strand at 581.871 kb on + strand at 581.871 kb on + strand at 581.872 kb on - strand at 581.925 kb on - strand at 581.928 kb on + strand at 581.928 kb on + strand at 581.928 kb on + strand at 581.928 kb on + strand at 581.929 kb on - strand at 581.929 kb on - strand at 581.929 kb on - strand at 581.929 kb on - strand at 582.033 kb on + strand at 582.034 kb on - strand at 582.034 kb on - strand at 582.034 kb on - strand at 582.335 kb on - strand, within H281DRAFT_03497 at 582.335 kb on - strand, within H281DRAFT_03497 at 582.842 kb on + strand, within H281DRAFT_03498 at 582.918 kb on - strand, within H281DRAFT_03498 at 582.976 kb on + strand, within H281DRAFT_03498 at 583.021 kb on + strand, within H281DRAFT_03498 at 583.061 kb on + strand at 583.062 kb on - strand at 583.062 kb on - strand at 583.165 kb on + strand at 583.165 kb on + strand at 583.176 kb on + strand at 583.176 kb on + strand at 583.177 kb on - strand at 583.177 kb on - strand at 583.188 kb on - strand at 583.221 kb on - strand at 583.221 kb on - strand at 583.356 kb on + strand at 583.356 kb on + strand at 583.357 kb on - strand at 583.357 kb on - strand at 583.438 kb on + strand, within H281DRAFT_03499 at 583.468 kb on - strand, within H281DRAFT_03499 at 583.645 kb on + strand, within H281DRAFT_03499 at 583.646 kb on - strand, within H281DRAFT_03499 at 583.724 kb on - strand, within H281DRAFT_03499 at 583.724 kb on - strand, within H281DRAFT_03499
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 581,792 - +0.7 581,871 + +3.8 581,871 + +0.5 581,872 - +0.8 581,925 - +1.0 581,928 + -1.1 581,928 + +0.7 581,928 + +0.1 581,928 + -0.6 581,929 - +0.8 581,929 - +0.3 581,929 - +0.4 581,929 - +0.0 582,033 + -0.3 582,034 - +0.5 582,034 - -0.1 582,034 - +0.4 582,335 - H281DRAFT_03497 0.43 -0.0 582,335 - H281DRAFT_03497 0.43 +0.3 582,842 + H281DRAFT_03498 0.25 +1.0 582,918 - H281DRAFT_03498 0.52 +0.0 582,976 + H281DRAFT_03498 0.73 +0.9 583,021 + H281DRAFT_03498 0.89 +0.4 583,061 + -0.5 583,062 - +0.1 583,062 - +0.0 583,165 + +0.3 583,165 + +0.2 583,176 + +0.4 583,176 + -0.4 583,177 - +0.4 583,177 - -1.1 583,188 - -0.1 583,221 - +0.4 583,221 - +0.5 583,356 + +0.7 583,356 + +0.1 583,357 - +1.3 583,357 - +0.0 583,438 + H281DRAFT_03499 0.11 +0.4 583,468 - H281DRAFT_03499 0.14 -1.8 583,645 + H281DRAFT_03499 0.30 +0.0 583,646 - H281DRAFT_03499 0.30 -0.3 583,724 - H281DRAFT_03499 0.38 +2.0 583,724 - H281DRAFT_03499 0.38 +0.5
Or see this region's nucleotide sequence