Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02902 and H281DRAFT_02903 are separated by 57 nucleotides H281DRAFT_02903 and H281DRAFT_02904 overlap by 14 nucleotides
H281DRAFT_02902: H281DRAFT_02902 - VRR-NUC domain-containing protein, at 509,752 to 511,575
_02902
H281DRAFT_02903: H281DRAFT_02903 - L-lactate dehydrogenase complex protein LldG, at 511,633 to 512,220
_02903
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
Position (kb) 511
512
513 Strain fitness (log2 ratio) -1
0
1 at 510.952 kb on + strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.294 kb on + strand, within H281DRAFT_02902 at 511.529 kb on + strand at 511.532 kb on + strand at 511.533 kb on - strand at 511.602 kb on - strand at 511.839 kb on - strand, within H281DRAFT_02903 at 512.302 kb on + strand at 512.303 kb on - strand at 512.303 kb on - strand at 512.473 kb on + strand, within H281DRAFT_02904 at 512.474 kb on - strand, within H281DRAFT_02904 at 512.476 kb on - strand, within H281DRAFT_02904 at 512.615 kb on - strand, within H281DRAFT_02904 at 512.622 kb on + strand, within H281DRAFT_02904 at 512.623 kb on - strand, within H281DRAFT_02904 at 512.796 kb on + strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.035 kb on - strand, within H281DRAFT_02904 at 513.060 kb on + strand, within H281DRAFT_02904 at 513.061 kb on - strand, within H281DRAFT_02904 at 513.073 kb on + strand, within H281DRAFT_02904 at 513.217 kb on + strand, within H281DRAFT_02904
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 510,952 + H281DRAFT_02902 0.66 +0.6 511,157 - H281DRAFT_02902 0.77 +0.1 511,157 - H281DRAFT_02902 0.77 -0.6 511,294 + H281DRAFT_02902 0.85 -0.2 511,529 + -0.0 511,532 + -0.5 511,533 - -0.3 511,602 - -0.3 511,839 - H281DRAFT_02903 0.35 +0.6 512,302 + -0.4 512,303 - -0.3 512,303 - +0.2 512,473 + H281DRAFT_02904 0.19 -0.1 512,474 - H281DRAFT_02904 0.19 +1.1 512,476 - H281DRAFT_02904 0.19 +0.2 512,615 - H281DRAFT_02904 0.29 +0.8 512,622 + H281DRAFT_02904 0.30 +0.2 512,623 - H281DRAFT_02904 0.30 +0.3 512,796 + H281DRAFT_02904 0.42 +0.0 513,035 - H281DRAFT_02904 0.59 +0.5 513,035 - H281DRAFT_02904 0.59 +0.6 513,060 + H281DRAFT_02904 0.61 -0.6 513,061 - H281DRAFT_02904 0.61 +0.7 513,073 + H281DRAFT_02904 0.62 +0.1 513,217 + H281DRAFT_02904 0.73 +0.1
Or see this region's nucleotide sequence