Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01327 and H281DRAFT_01328 are separated by 15 nucleotides H281DRAFT_01328 and H281DRAFT_01329 overlap by 4 nucleotides H281DRAFT_01329 and H281DRAFT_01330 overlap by 4 nucleotides H281DRAFT_01330 and H281DRAFT_01331 are separated by 43 nucleotides
H281DRAFT_01327: H281DRAFT_01327 - formylmethanofuran dehydrogenase, subunit C, at 168,809 to 169,663
_01327
H281DRAFT_01328: H281DRAFT_01328 - cytochrome b561, at 169,679 to 170,242
_01328
H281DRAFT_01329: H281DRAFT_01329 - prolyl aminopeptidase (EC:3.4.11.5). Serine peptidase. MEROPS family S33, at 170,239 to 171,273
_01329
H281DRAFT_01330: H281DRAFT_01330 - pyrroloquinoline quinone biosynthesis protein B, at 171,270 to 172,190
_01330
H281DRAFT_01331: H281DRAFT_01331 - pyrroloquinoline-quinone synthase, at 172,234 to 172,986
_01331
Position (kb) 170
171
172 Strain fitness (log2 ratio) -1
0
1
2
3 at 169.433 kb on + strand, within H281DRAFT_01327 at 169.434 kb on - strand, within H281DRAFT_01327 at 169.806 kb on - strand, within H281DRAFT_01328 at 169.806 kb on - strand, within H281DRAFT_01328 at 169.807 kb on + strand, within H281DRAFT_01328 at 169.807 kb on + strand, within H281DRAFT_01328 at 169.808 kb on - strand, within H281DRAFT_01328 at 169.808 kb on - strand, within H281DRAFT_01328 at 169.808 kb on - strand, within H281DRAFT_01328 at 169.808 kb on - strand, within H281DRAFT_01328 at 169.900 kb on - strand, within H281DRAFT_01328 at 170.147 kb on + strand, within H281DRAFT_01328 at 170.147 kb on + strand, within H281DRAFT_01328 at 170.148 kb on - strand, within H281DRAFT_01328 at 170.277 kb on + strand at 170.277 kb on + strand at 170.277 kb on + strand at 170.277 kb on + strand at 170.278 kb on - strand at 170.538 kb on + strand, within H281DRAFT_01329 at 170.555 kb on + strand, within H281DRAFT_01329 at 170.567 kb on + strand, within H281DRAFT_01329 at 170.567 kb on + strand, within H281DRAFT_01329 at 170.568 kb on - strand, within H281DRAFT_01329 at 170.568 kb on - strand, within H281DRAFT_01329 at 170.621 kb on - strand, within H281DRAFT_01329 at 170.968 kb on + strand, within H281DRAFT_01329 at 170.969 kb on - strand, within H281DRAFT_01329 at 170.969 kb on - strand, within H281DRAFT_01329 at 170.986 kb on + strand, within H281DRAFT_01329 at 171.237 kb on + strand at 171.238 kb on - strand at 171.284 kb on - strand at 171.597 kb on + strand, within H281DRAFT_01330 at 171.598 kb on - strand, within H281DRAFT_01330 at 171.774 kb on + strand at 171.858 kb on + strand, within H281DRAFT_01330 at 171.995 kb on + strand, within H281DRAFT_01330 at 172.075 kb on + strand, within H281DRAFT_01330 at 172.076 kb on - strand at 172.134 kb on - strand at 172.186 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 169,433 + H281DRAFT_01327 0.73 +0.4 169,434 - H281DRAFT_01327 0.73 +0.5 169,806 - H281DRAFT_01328 0.23 +0.3 169,806 - H281DRAFT_01328 0.23 +0.4 169,807 + H281DRAFT_01328 0.23 +0.4 169,807 + H281DRAFT_01328 0.23 -0.2 169,808 - H281DRAFT_01328 0.23 -0.1 169,808 - H281DRAFT_01328 0.23 +0.1 169,808 - H281DRAFT_01328 0.23 +0.5 169,808 - H281DRAFT_01328 0.23 -0.8 169,900 - H281DRAFT_01328 0.39 -0.5 170,147 + H281DRAFT_01328 0.83 -0.3 170,147 + H281DRAFT_01328 0.83 -0.5 170,148 - H281DRAFT_01328 0.83 -0.1 170,277 + -0.0 170,277 + +1.3 170,277 + +0.8 170,277 + -1.2 170,278 - +0.2 170,538 + H281DRAFT_01329 0.29 +1.7 170,555 + H281DRAFT_01329 0.31 +3.1 170,567 + H281DRAFT_01329 0.32 -0.1 170,567 + H281DRAFT_01329 0.32 +1.0 170,568 - H281DRAFT_01329 0.32 +0.2 170,568 - H281DRAFT_01329 0.32 +0.0 170,621 - H281DRAFT_01329 0.37 +0.4 170,968 + H281DRAFT_01329 0.70 +0.7 170,969 - H281DRAFT_01329 0.71 +0.7 170,969 - H281DRAFT_01329 0.71 +0.5 170,986 + H281DRAFT_01329 0.72 +0.3 171,237 + +0.6 171,238 - -0.2 171,284 - +0.2 171,597 + H281DRAFT_01330 0.36 -0.4 171,598 - H281DRAFT_01330 0.36 +0.8 171,774 + -0.6 171,858 + H281DRAFT_01330 0.64 -0.3 171,995 + H281DRAFT_01330 0.79 -0.2 172,075 + H281DRAFT_01330 0.87 +0.2 172,076 - -0.6 172,134 - +0.3 172,186 + +0.0
Or see this region's nucleotide sequence