Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00404 and H281DRAFT_00405 are separated by 257 nucleotides H281DRAFT_00405 and H281DRAFT_00406 are separated by 228 nucleotides H281DRAFT_00406 and H281DRAFT_00407 are separated by 239 nucleotides H281DRAFT_00407 and H281DRAFT_00408 are separated by 109 nucleotides H281DRAFT_00408 and H281DRAFT_00409 are separated by 83 nucleotides
H281DRAFT_00404: H281DRAFT_00404 - protein of unknown function (DUF4397), at 447,978 to 448,772
_00404
H281DRAFT_00405: H281DRAFT_00405 - Predicted small secreted protein, at 449,030 to 449,164
_00405
H281DRAFT_00406: H281DRAFT_00406 - Signal transduction histidine kinase, at 449,393 to 450,934
_00406
H281DRAFT_00407: H281DRAFT_00407 - Protein of unknown function (DUF1328), at 451,174 to 451,350
_00407
H281DRAFT_00408: H281DRAFT_00408 - Protein of unknown function (DUF1328), at 451,460 to 451,621
_00408
H281DRAFT_00409: H281DRAFT_00409 - bacterioferritin, at 451,705 to 452,277
_00409
Position (kb) 449
450
451 Strain fitness (log2 ratio) -1
0
1 at 448.474 kb on + strand, within H281DRAFT_00404 at 448.474 kb on + strand, within H281DRAFT_00404 at 448.557 kb on + strand, within H281DRAFT_00404 at 448.599 kb on + strand, within H281DRAFT_00404 at 448.770 kb on + strand at 448.888 kb on + strand at 448.889 kb on - strand at 448.889 kb on - strand at 448.889 kb on - strand at 449.057 kb on - strand, within H281DRAFT_00405 at 449.189 kb on - strand at 449.194 kb on + strand at 449.195 kb on - strand at 449.220 kb on + strand at 449.220 kb on + strand at 449.316 kb on + strand at 449.350 kb on + strand at 449.351 kb on - strand at 449.677 kb on - strand, within H281DRAFT_00406 at 450.633 kb on - strand, within H281DRAFT_00406 at 450.887 kb on - strand at 450.887 kb on - strand at 450.901 kb on + strand at 450.963 kb on - strand at 451.120 kb on + strand at 451.130 kb on + strand at 451.470 kb on - strand at 451.557 kb on + strand, within H281DRAFT_00408 at 451.565 kb on + strand, within H281DRAFT_00408 at 451.903 kb on + strand, within H281DRAFT_00409
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 448,474 + H281DRAFT_00404 0.62 +0.4 448,474 + H281DRAFT_00404 0.62 +0.2 448,557 + H281DRAFT_00404 0.73 +0.5 448,599 + H281DRAFT_00404 0.78 -1.0 448,770 + -0.6 448,888 + +0.3 448,889 - +0.6 448,889 - +0.1 448,889 - -0.6 449,057 - H281DRAFT_00405 0.20 -0.6 449,189 - +0.0 449,194 + +0.1 449,195 - +0.2 449,220 + -0.1 449,220 + +0.4 449,316 + +0.2 449,350 + +0.4 449,351 - -0.2 449,677 - H281DRAFT_00406 0.18 +1.0 450,633 - H281DRAFT_00406 0.80 +0.7 450,887 - +0.2 450,887 - +0.8 450,901 + -0.0 450,963 - +0.6 451,120 + +0.5 451,130 + +0.3 451,470 - +0.3 451,557 + H281DRAFT_00408 0.60 +0.0 451,565 + H281DRAFT_00408 0.65 +0.4 451,903 + H281DRAFT_00409 0.35 -0.0
Or see this region's nucleotide sequence