Strain Fitness in Marinobacter adhaerens HP15 around HP15_2995
Experiment: m.b. Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,138,487 | + | +0.4 | |||
3,138,495 | - | -0.4 | |||
3,138,573 | - | +0.4 | |||
3,138,587 | + | HP15_2995 | 0.11 | -0.0 | |
3,138,676 | - | HP15_2995 | 0.23 | +0.3 | |
3,138,745 | - | HP15_2995 | 0.32 | +0.7 | |
3,138,789 | + | HP15_2995 | 0.38 | +0.2 | |
3,138,967 | - | HP15_2995 | 0.62 | +0.8 | |
3,139,052 | - | HP15_2995 | 0.73 | -0.1 | |
3,139,056 | + | HP15_2995 | 0.74 | -0.3 | |
3,139,127 | + | HP15_2995 | 0.84 | +0.4 | |
3,139,183 | - | +0.6 | |||
3,139,230 | + | +0.5 | |||
3,139,404 | + | -0.7 | |||
3,139,458 | + | -1.2 | |||
3,139,474 | - | +0.1 | |||
3,139,657 | + | HP15_2996 | 0.25 | +1.0 | |
3,139,714 | + | HP15_2996 | 0.30 | -1.3 | |
3,139,826 | + | HP15_2996 | 0.39 | -0.7 | |
3,139,980 | - | HP15_2996 | 0.52 | -0.5 | |
3,139,992 | + | HP15_2996 | 0.53 | +0.1 | |
3,139,992 | + | HP15_2996 | 0.53 | +1.2 | |
3,140,050 | + | HP15_2996 | 0.58 | -0.2 | |
3,140,058 | - | HP15_2996 | 0.59 | +0.2 | |
3,140,156 | - | HP15_2996 | 0.67 | +0.1 |
Or see this region's nucleotide sequence