Strain Fitness in Marinobacter adhaerens HP15 around HP15_1537
Experiment: m.b. Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Sisomicin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,621,284 | - | HP15_1536 | 0.38 | -0.1 | |
1,621,542 | + | HP15_1537 | 0.13 | +0.2 | |
1,621,665 | - | HP15_1537 | 0.23 | +0.2 | |
1,621,756 | - | HP15_1537 | 0.30 | -0.4 | |
1,621,825 | + | HP15_1537 | 0.36 | +0.7 | |
1,622,077 | + | HP15_1537 | 0.56 | -0.5 | |
1,622,077 | + | HP15_1537 | 0.56 | +0.1 | |
1,622,156 | + | HP15_1537 | 0.62 | -0.3 | |
1,622,193 | + | HP15_1537 | 0.65 | +0.5 | |
1,622,193 | + | HP15_1537 | 0.65 | +0.7 | |
1,622,193 | + | HP15_1537 | 0.65 | -1.7 | |
1,622,249 | + | HP15_1537 | 0.70 | -1.1 | |
1,622,257 | - | HP15_1537 | 0.70 | +1.0 | |
1,622,293 | + | HP15_1537 | 0.73 | +0.3 | |
1,622,301 | - | HP15_1537 | 0.74 | +0.3 | |
1,622,311 | - | HP15_1537 | 0.74 | -0.1 | |
1,622,320 | - | HP15_1537 | 0.75 | -2.2 | |
1,622,392 | - | HP15_1537 | 0.81 | -1.1 | |
1,622,472 | + | HP15_1537 | 0.87 | +0.5 | |
1,622,493 | + | HP15_1537 | 0.89 | +0.2 | |
1,622,555 | + | +0.3 | |||
1,622,701 | - | -0.7 | |||
1,622,713 | + | -0.6 | |||
1,622,749 | - | -0.3 | |||
1,622,768 | - | +0.6 | |||
1,622,921 | - | HP15_1538 | 0.18 | +0.3 | |
1,622,967 | - | HP15_1538 | 0.21 | +0.2 | |
1,622,973 | + | HP15_1538 | 0.22 | -0.2 | |
1,622,981 | - | HP15_1538 | 0.22 | -1.1 | |
1,623,157 | + | HP15_1538 | 0.34 | +0.2 | |
1,623,212 | - | HP15_1538 | 0.38 | +0.3 |
Or see this region's nucleotide sequence